Commit Graph

970 Commits (release/4.3a0)

Author SHA1 Message Date
Varun Agrawal 1744c4aeb3 save stubs to 'stubs' directory and use cp instead of rsync 2024-08-26 10:07:24 -04:00
Varun Agrawal 48f9d0b116 fix if-else mistype 2024-08-26 09:44:28 -04:00
Varun Agrawal da99cf0e19 remove extraneous variable 2024-08-26 06:25:17 -04:00
Varun Agrawal bfcd5eb08a use older version of mypy 2024-08-26 05:48:18 -04:00
Frank Dellaert 55e3ac5e0e
Merge pull request #1812 from borglab/set-pybind11-path
Use bundled `pybind11` for Python wrapper
2024-08-25 18:49:58 -07:00
Varun Agrawal 0e73367345 stubgen only for Windows until we can find the rsync equivalent 2024-08-25 18:57:03 -04:00
Frank Dellaert ce74b2b0c1 Elaborate solution that works on windows as well 2024-08-25 15:47:57 -07:00
Frank Dellaert 0ba23ccbaa Try w cross-platform install 2024-08-25 15:31:25 -07:00
Frank Dellaert d1d6942bde Correct cmake line 2024-08-25 14:40:44 -07:00
Frank Dellaert 9307536827 Add venv on Mac and do not use --user flag in that case 2024-08-25 13:49:43 -07:00
Varun Agrawal 5f43b69c43 add mypy to the dev_requirements so we can get stubgen 2024-08-25 16:45:23 -04:00
Frank Dellaert 9dbbb32814 Add dangerous flag 2024-08-25 13:17:16 -07:00
Varun Agrawal e58a5c4cac directly add pybind11 subdirectory so files are generated correctly 2024-08-25 15:41:55 -04:00
Varun Agrawal f2d69ed697 always use bundled pybind11 inside wrap 2024-08-25 14:47:14 -04:00
Varun Agrawal 48215b9063 remove duplicate target 2024-08-25 14:03:43 -04:00
Varun Agrawal 51aadbda34 add type hints and make command to test gtsam_unstable for python 2024-08-25 13:59:48 -04:00
Varun Agrawal 353ff644fc generate python type hints during pip build 2024-08-25 13:59:12 -04:00
Varun Agrawal c57d5a0f70 Updated porting progress 2024-08-25 07:23:31 -04:00
Varun Agrawal b94ab31e1f localization example script which gives exact same result as C++ version 2024-08-25 04:36:00 -04:00
Varun Agrawal 95da15a61a allow stl binding for pybind11 in gtsam_unstable 2024-08-25 04:35:33 -04:00
Varun Agrawal df57d9607f allow numpy version 2.0.0 2024-06-28 11:04:24 -04:00
Varun Agrawal 788826a72a more explicit numpy version to avoid compiler issues 2024-06-28 09:15:58 -04:00
Varun Agrawal 75f9a901f3 restrict numpy to under v2.0.0 2024-06-27 21:57:15 -04:00
Varun Agrawal 2dfd15e16c
Merge pull request #1712 from borglab/update-wrap 2024-01-16 23:52:27 -05:00
Varun Agrawal b2e4fa2112 tests for dunder methods 2024-01-16 15:17:26 -05:00
Tal Regev 2971d9e74e Compile gtsam python for windows 2024-01-13 10:59:03 +02:00
Varun Agrawal 9d70605d48
Merge pull request #1681 from borglab/fix-1675 2023-12-07 17:01:20 -05:00
Varun Agrawal 6f365b330b fix call to Ellipse, plus some formatting 2023-12-04 05:04:06 -05:00
Varun Agrawal e56e9b5ef9 fix unittest assertion deprecation 2023-11-06 11:05:50 -05:00
Varun Agrawal c4d11c498c fix unittest assertion deprecation 2023-11-06 11:05:23 -05:00
Varun Agrawal 36dc04d126 override WeightMatrix for Chebyshev2 2023-10-28 11:24:31 -04:00
Varun Agrawal f875662040 Merge branch 'develop' into fixes 2023-10-08 11:01:39 -04:00
Varun Agrawal 1d861d49d7 remove automatic install of python dev dependencies, leave that to the user 2023-10-07 16:11:50 -04:00
Varun Agrawal 4de8f149f8 fix docstring 2023-09-28 07:18:11 -04:00
Varun Agrawal b8ec765035 remove requirements install step as it is now a part of the cmake process 2023-09-05 12:40:21 -04:00
Varun Agrawal cb661a9f89 use variable for Python source directory 2023-09-05 12:38:37 -04:00
Varun Agrawal 42e4a4f6da install dev dependencies using CMake 2023-09-05 12:37:12 -04:00
Varun Agrawal 67ef015e0c separate required and dev dependencies 2023-09-05 12:36:56 -04:00
Varun Agrawal fe2080f2b1 fix warnings due to PEP 420 2023-09-05 12:04:54 -04:00
Frank Dellaert 2f2d6546d1 Fix 4.3 python style 2023-09-02 16:55:38 -07:00
Clark Taylor 039f5cf711
Update CustomFactorExample.py with comments to explain typing 2023-09-01 14:18:45 -04:00
Clark Taylor 8611aec3fb
Update CustomFactors.md to document return type. 2023-09-01 14:17:04 -04:00
Clark Taylor 8ee9f20537
Update CustomFactorExample.py to correctly document return types 2023-09-01 14:15:39 -04:00
Clark Taylor 3d6e2fc81c
Update CustomFactors.md to more clearly specify types required 2023-09-01 14:12:47 -04:00
senselessdev1 12f919dc55 Cherrypick transitivity fix for DsfTrackGenerator 2023-08-30 22:09:07 -04:00
senselessdev1 8c321ba226 add fix 2023-08-30 11:17:40 -04:00
senselessdev1 2b5e22ccb5 remove scales arg to Keypoints 2023-08-30 10:54:30 -04:00
senselessdev1 f205ff3766 fix typo 2023-08-30 10:28:18 -04:00
senselessdev1 db6a559fb9 add another unit test 2023-08-30 10:22:36 -04:00
Fan Jiang 7d04f4bce6 Add custom unit test for Python robust function 2023-08-21 10:59:14 -04:00
Frank Dellaert 57291e132f added examples and a test on pMin 2023-07-19 13:09:13 +02:00
Frank Dellaert 6eeceb679a Fix unit tests 2023-07-17 16:55:20 +02:00
Frank Dellaert 433ef9050f Better test names
(cherry picked from commit 3edde4d693)
2023-07-17 16:55:20 +02:00
Frank Dellaert a4b9f0c705 more discrete BT wrapper + test
(cherry picked from commit 3d979763f0)
2023-07-17 16:55:20 +02:00
Frank Dellaert 3a9f5578d6 multifrontal MPE in python
(cherry picked from commit 10f30e1ca9)
2023-07-17 16:55:20 +02:00
Frank Dellaert ea12d0dac9 Test more things in BayesTree
(cherry picked from commit c8fe2fcff2)
2023-07-17 16:55:20 +02:00
Frank Dellaert d5f62dd4ee wrapped List[float] constructor
(cherry picked from commit e1802814ca)
2023-07-17 16:55:20 +02:00
Frank Dellaert 968a72344c Fixed regression test 2023-07-17 16:55:20 +02:00
Frank Dellaert 2453c37b2b Skip test that is problematic for gcc 2023-07-16 14:54:14 +02:00
Frank Dellaert 3edde4d693 Address review comments 2023-07-16 12:37:01 +02:00
Varun Agrawal a14fb8db7d formatting and fix 2023-07-06 04:12:39 -04:00
Varun Agrawal 93ed850c6c get tests working 2023-07-05 13:14:16 -04:00
Varun Agrawal 42e8f498e7 added tests for newly wrapped isam2 methods 2023-07-05 12:44:42 -04:00
Varun Agrawal 6992f0d64c added test for full ISAM2 update method 2023-07-05 12:37:25 -04:00
Varun Agrawal 0ac12c9d32 add tests for Python wrapper backwards compatibility 2023-06-21 16:02:37 -04:00
Varun Agrawal 6f94f52f41 modernize main tests 2023-06-21 16:02:18 -04:00
Varun Agrawal 1f951f7dfe add typedefs to ensure backwards compatibility 2023-06-20 10:06:12 -04:00
Varun Agrawal 55ce145bf7 undo changes to tests to ensure backwards compatibility 2023-06-20 10:05:52 -04:00
Frank Dellaert 3d979763f0 more discrete BT wrapper + test 2023-06-19 07:38:19 -07:00
Varun Agrawal 2340f1aa09 uncomment test 2023-06-16 05:53:50 -04:00
Varun Agrawal e70f8af448 leftover classes to re-add 2023-06-15 17:55:33 -04:00
Varun Agrawal 31adb3ed45 fix remaining python tests 2023-06-15 16:34:37 -04:00
Varun Agrawal 5b588f2ea7 update sfm module 2023-06-15 16:30:10 -04:00
Varun Agrawal 7c22b03b9e Merge branch 'develop' into wrap/pybind-stl 2023-06-15 15:46:38 -04:00
Frank Dellaert 10f30e1ca9 multifrontal MPE in python 2023-06-10 13:56:14 -07:00
Frank Dellaert c8fe2fcff2 Test more things in BayesTree 2023-06-04 22:39:14 +01:00
Frank Dellaert e1802814ca wrapped List[float] constructor 2023-06-04 16:27:28 +01:00
roderick-koehle 5bf11de6cf
Merge branch 'borglab:develop' into patch-4 2023-04-18 12:17:51 +02:00
Michael R. Walker II bb7b175868
Windows fix for CMake copy test files
For cmake version 3.22.1, existing code worked on Linux, but failed on Windows 10 (?!?). 
Clarifying relative paths fixed the issue and worked on both systems.
2023-04-14 13:19:17 -06:00
roderick-koehle db6792c894
Fix invalid rotation matrix in test_rotate()
The python unittest `test_Rot3` fails in case gtsam is compiled with cmake option `-D GTSAM_USE_QUATERNION=ON`.
The cause of the test failure is an invalid rotationmatrix with negative determinant in `test_rotate()`.
2023-03-24 14:46:00 +01:00
Jose Luis Blanco Claraco ffc09cb56b
Allow using system pybind11 if it exists.
Integrated upstream from https://salsa.debian.org/science-team/gtsam/-/blob/master/debian/patches/0003-Using-the-system-pybind11.patch
with the additional fix for the cmake policy.

cc: @dkogan
2023-03-06 01:15:00 +01:00
Varun Agrawal 814c4a6e6f Merge branch 'develop' into combined-imu-factor 2023-03-01 15:50:54 -05:00
Varun Agrawal e4b1505e38 fix ImuFactor examples to show correct prediction values 2023-03-01 15:40:55 -05:00
Frank Dellaert 1bf6954372 Merge branch 'develop' into wrapper/update 2023-02-23 08:07:33 -08:00
Frank Dellaert 2ce0b57f05 Fixed python wrapper 2023-02-20 08:20:16 -08:00
Varun Agrawal 9a38b57144 update wrapper files to new version 2023-02-18 19:34:23 -05:00
Kevin 92443f5378 Simply sum-product test in Python. 2023-02-11 20:04:43 -05:00
Kevin 548509f28b First pass at underflow test for sum-product. 2023-02-10 17:02:27 -05:00
Kevin 0710a8a893 Add normalization trick to sum-product. 2023-02-08 14:15:32 -05:00
Kevin 571b0f5e90 Add toy problem testing max-product underflow. 2023-02-07 10:43:16 -05:00
Varun Agrawal 3b21f4779d separate .i file for Values 2023-02-05 18:08:58 -05:00
Frank Dellaert b3e87360d5 Add missing header to fix gtbook. 2023-01-28 16:39:57 -08:00
kartik arcot ce847d4ff9 python bindings don't use boost 2023-01-22 08:40:02 -08:00
kartik arcot 852e8768c0 shared_ptr, make_shared, allocate_shared 2023-01-22 08:40:02 -08:00
kartik arcot d886e78afa disabled two python tests 2023-01-21 09:27:20 -08:00
kartik arcot cccad07849 diabled two python tests 2023-01-20 18:06:55 -08:00
Frank Dellaert 469e57122f commented out problematic python tests 2023-01-19 22:34:12 -08:00
Frank Dellaert 9af7236980 Added DEBUG_MARGINALS flag 2023-01-16 18:36:28 -08:00
Frank Dellaert 8357fc7e02 Fix python tests (and expose HybridBayesNet.error) 2023-01-16 18:04:22 -08:00
Frank Dellaert 96e3eb7d8b Some test refactoring 2023-01-16 10:30:47 -08:00
Frank Dellaert 681c75cea4 Expose toFactorGraph to wrapper 2023-01-16 10:30:47 -08:00
Frank Dellaert 51c46410dc Make sure all conditional methods can be called in wrappers and satisfy invariants there, as well. 2023-01-14 13:24:54 -08:00
Frank Dellaert 28f440a623 Resolved review comments. 2023-01-11 18:11:28 -08:00
Frank Dellaert 87ff4af32d Wrapper and tests for logProbability 2023-01-10 23:13:40 -08:00
Frank Dellaert 2e233364b6 Merge branch 'develop' into hybrid/refactor
# Conflicts:
#	gtsam/hybrid/HybridGaussianFactorGraph.cpp
#	gtsam/hybrid/tests/testHybridGaussianFactorGraph.cpp
#	python/gtsam/tests/test_HybridNonlinearFactorGraph.py
2023-01-08 00:16:23 -08:00
Frank Dellaert 8d96b3efb9 Fix python test to not use add 2023-01-06 23:23:12 -08:00
Varun Agrawal 74998336d9 update tests 2023-01-06 10:14:24 -05:00
Frank Dellaert d49bcce780 Fix python wrapper 2023-01-05 12:58:29 -08:00
Frank Dellaert 625977ee06 Example with 2 measurements agrees with importance sampling 2023-01-02 16:07:25 -05:00
Frank Dellaert 021ee1a5d9 Deterministic example, much more generic importance sampler 2023-01-02 12:34:55 -05:00
Frank Dellaert 312ba5fd52 Synced two examples 2023-01-02 09:45:04 -05:00
Frank Dellaert 64831300a5 Print estimated marginals and ratios! 2023-01-01 11:48:08 -05:00
Frank Dellaert dcb07fea8c Test eliminate 2023-01-01 11:25:33 -05:00
Frank Dellaert cec26d16ea Check marginals in addition to ratios for non-uniform mode prior 2022-12-30 15:20:10 -05:00
Frank Dellaert 96b6895a60 Ratios now work out! 2022-12-30 13:59:59 -05:00
Frank Dellaert f22ada6c0a Added importance sampling 2022-12-30 13:16:12 -05:00
Frank Dellaert 23eec0bc6a factor_graph_from_bayes_net 2022-12-30 13:16:01 -05:00
Varun Agrawal 1beeef840b Merge branch 'develop' into hybrid/model-selection 2022-12-30 17:09:26 +05:30
Varun Agrawal 10079f6341 comment out problematic code until we figure it out 2022-12-30 14:51:04 +05:30
Varun Agrawal 5ea63be8c5 fixes based on previous PR 2022-12-30 14:23:40 +05:30
Frank Dellaert 33b073c795 Comment out printing and asserts 2022-12-29 22:39:08 -05:00
Frank Dellaert 6b2a8a9323 Show that ratio is different for different modes. 2022-12-29 16:41:31 -05:00
Frank Dellaert a4659f01c7 Add error and probPrime variants 2022-12-29 14:13:35 -05:00
Frank Dellaert 2d688a1986 Added tests to convert Hybrid BN to corresponding "likelihood" FG 2022-12-29 13:55:06 -05:00
Frank Dellaert d4ee6997f7 Remove FromConditionals 2022-12-29 13:54:44 -05:00
Varun Agrawal 1eb6fc77a0 fix formatting and other issues 2022-12-29 10:33:33 +05:30
Varun Agrawal cc2183adb3 fix wrap preamble 2022-12-29 10:32:46 +05:30
Varun Agrawal f4420f2c8d add mixture to bayesnet and fix double assert bug 2022-12-29 08:40:46 +05:30
Varun Agrawal 03baf8f75e formatting and fixes to test 2022-12-29 08:33:14 +05:30
Varun Agrawal 873f5baf56 remove unnecessary preamble and specializations for hybrid wrapping 2022-12-29 08:32:43 +05:30
Frank Dellaert 7c91fe82b4 Add evaluate test 2022-12-28 18:10:07 -05:00
Frank Dellaert fd12181ebe Cleanup 2022-12-28 18:10:00 -05:00
Frank Dellaert 1de49598af Add methods in HybridBayesNet 2022-12-28 18:09:53 -05:00
Frank Dellaert 0495f81104 Test for GBN::sample 2022-12-28 16:51:40 -05:00
Varun Agrawal af6a4f2417
Merge pull request #1302 from borglab/wrap-unit3-rot 2022-12-24 23:43:39 -05:00
Akshay Krishnan 3a2816e4fc add unrotate() test 2022-12-24 10:15:08 -05:00
Akshay Krishnan fd55e09bcc add rotate() test 2022-12-24 10:06:28 -05:00
ulterzlw 1ea6553550
Fixed Jacobian in python CustomFactorExample 2022-12-07 14:53:32 +08:00
Varun Agrawal 4c7dcb3efd better error messages from Pybind 2022-11-07 18:31:29 -05:00
Varun Agrawal 3da27a5df7 add docstring to test and fix assert 2022-10-26 12:42:45 -04:00
Frank Dellaert 32df824920 Vectorized interface 2022-10-23 16:27:01 -07:00
Frank Dellaert 90c990dc33 Rename of test 2022-10-23 16:26:41 -07:00
Frank Dellaert f68f0dbe41 Addressed review comments - removed class in favor of free function 2022-10-23 11:37:37 -07:00
Frank Dellaert ca451141c0 removed NamedSfmMeasurementVector 2022-10-22 19:48:48 -07:00
Frank Dellaert 7e411fee51 Refactor into smaller functions 2022-10-22 19:18:45 -07:00
Frank Dellaert 38be12eaf4 Use SfmMeasurement and SfmTrack 2022-10-22 19:18:06 -07:00
Varun Agrawal 090fb4e275 Add python example for CombinedImuFactor 2022-10-14 17:11:24 -04:00
senselessdev1 73fd3f9dc2 add namespace hack to prevent gtsam.gtsam.gtsfm 2022-10-13 09:12:55 -04:00
senselessdev1 f9971f5049 use gtsam.gtsfm namespace for new API 2022-10-13 01:07:41 -04:00
senselessdev1 7dee1af5b4 add verbose flag for logging messages during DSF track generation 2022-10-12 23:31:45 -04:00
senselessdev1 4f406650f7 rename KeypointsList -> KeypointsVector 2022-10-12 21:29:18 -04:00
senselessdev1 cafab61fec expand tests 2022-09-27 10:29:36 -04:00
senselessdev1 96aaff4bc6 wrap vector of NamedSfmMeasurement 2022-09-26 20:42:03 -04:00
John Lambert fa17c50910
Add SfmTrack2dVector to ignore list 2022-09-26 18:41:59 -04:00
senselessdev1 a3069a3fbc remove opaque on sfmtrack2d 2022-09-26 11:58:07 -04:00
senselessdev1 2434dc8ab7 add to preamble/specialization 2022-09-26 11:36:39 -04:00
senselessdev1 a2109a2437 pass in IndexPair arguments 2022-09-26 10:56:44 -04:00
senselessdev1 8007271f4b Merge branch 'develop' of https://github.com/borglab/gtsam into dsf-gtsfm-to-gtsam-port 2022-09-26 10:31:59 -04:00
Fan Jiang 1bb7a00000 Add wrapping for hybrid nonlinear 2022-08-26 11:47:41 -04:00
sjxue c4184e192b fix error in python unit test 2022-08-18 19:35:06 -04:00
sjxue 746ca7856d Address review comments 2022-08-18 17:50:20 -04:00
Varun Agrawal 42bab8f3e7 use KeyVector for GNC inliers & outliers 2022-07-25 22:19:29 -04:00
Varun Agrawal eb6e56a4f8 Mark JacobianVector as opaque 2022-07-25 17:20:09 -04:00
Varun Agrawal c97b9a3bc6 Merge branch 'develop' into wrap/pybind-stl 2022-07-25 16:49:49 -04:00
senselessdev1 00cadab3b0 Merge branch 'develop' of https://github.com/borglab/gtsam into dsf-gtsfm-to-gtsam-port 2022-07-25 00:20:24 -04:00
Varun Agrawal c15d288418 Merge branch 'develop' into custom-factor-separate 2022-07-22 22:49:45 -04:00
Varun Agrawal 7edd021956 fix copying of test files in Cmake 2022-07-22 14:00:03 -04:00
Varun Agrawal 7eb9a95c5f minor fixes 2022-07-22 13:55:54 -04:00
Varun Agrawal 12b35b4142 remove pybind stl.h 2022-07-22 13:55:54 -04:00
Amado Antonini 029631e483 Merge branch 'develop' into main 2022-07-21 11:42:48 -04:00
Amado Antonini 90723d933e Remove pybind/stl.h again 2022-07-19 19:32:21 -04:00
Varun Agrawal 3d3703441c wrap custom factor in a separate file 2022-07-19 14:10:46 -04:00
Varun Agrawal d6415deac4 minor updates to sfm.h preamble 2022-07-19 12:13:20 -04:00
Varun Agrawal b60c5e3ab5 undo CustomFactor changes 2022-07-17 16:05:59 -04:00
Varun Agrawal a1d6ca207a Merge branch 'develop' into wrap/pybind-stl 2022-07-17 12:43:29 -04:00
senselessdev1 51fb3750e8 remove stray breakpoint 2022-07-17 00:31:42 -04:00
senselessdev1 361e3f601c Remove C++17 decompositions, and address comments 2022-07-16 22:29:01 -04:00
senselessdev1 6e45be3d98 fix all wrapper issues 2022-07-16 16:09:21 -04:00
senselessdev1 2434d3a41e Fix unwrapped SfmTrack2d, and instantiate generator before calling its method 2022-07-16 01:23:54 -04:00
senselessdev1 629b9cd955 clean up docstrings 2022-07-16 00:26:57 -04:00
senselessdev1 6e13456db4 Add Python unit test 2022-07-15 23:35:00 -04:00
senselessdev1 809923a6f2 Start GTSFM's DSF port to C++ 2022-07-15 23:32:03 -04:00
Amado Antonini e381a7c9d2 Revert pybind stl include 2022-07-13 23:28:45 -04:00
Amado Antonini 01ea316336 Make vector<size_t> opaque 2022-07-13 08:33:09 -04:00
Amado Antonini b4fdda4740 Run yapf 2022-07-08 16:49:04 -04:00
Amado Antonini 9dd1f8ffaf Adress review comments 2022-07-08 16:48:52 -04:00
Amado Antonini 26dd94bdaf Expose remaining attributes, add tests 2022-07-08 12:33:47 -04:00
Varun Agrawal 2ab09a580f add Python unit tests 2022-07-07 15:24:56 -04:00
yotams 7c077f8536 bugfix 2022-07-07 14:20:26 +03:00
yotams 7348586f60 1. changed interp name to slerp
2. added python tests for jacobians for some pose3 apis
2022-07-07 14:09:10 +03:00
vik748 0984fea3f5
Address matplotlib deprecation warnings for fig.gca() and window.set_title(). 2022-06-20 01:18:07 -07:00
Amado Antonini aee494a24f Expose GNC params to python 2022-06-14 17:07:29 -04:00
Varun Agrawal 2afa6781f8 fix python test 2022-06-02 09:20:43 -04:00
Varun Agrawal 7c7b5dd030 Rename files so that everything is HybridX 2022-06-01 23:52:21 -04:00
Varun Agrawal 852a9b9ef6 rename HybridFactorGraph to GaussianHybridFactorGraph 2022-05-28 14:25:12 -04:00
Varun Agrawal 3bde044248 add doc strings to python unit test and add assertions 2022-05-27 18:13:06 -04:00
Fan Jiang b8299d7ed6 Don't use Python dict method since it is not 2022-05-22 17:11:27 -07:00
Fan Jiang 2ae2cb6dc3 Don't crash anymore 2022-05-22 14:16:13 -07:00
Fan Jiang d5fd279449 Merge remote-tracking branch 'origin/develop' into fan/prototype-hybrid-tr 2022-05-21 13:56:41 -07:00
Frank Dellaert 06bc78175c
Merge pull request #1127 from borglab/feature/python/iterationHook 2022-05-13 13:48:18 -04:00