Abe
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fbe9aac41c
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squash local changes on top of gtsam upstream pull from 6/14/2016
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2016-06-18 23:13:59 -07:00 |
dellaert
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128bac616c
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Globally replaced FastSet<Key> with KeySet.
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2015-06-20 18:38:25 -07:00 |
Thomas Schneider
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ebf5746987
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Fix some serialization warnings.
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2015-03-06 16:12:09 +01:00 |
Richard Roberts
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a9ea1f4033
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Made Roots typedef in BayesTree
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2014-02-22 16:28:37 -05:00 |
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Richard Roberts
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686051c032
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Convert DOS line endings to UNIX
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2014-01-09 16:39:27 -05:00 |
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Richard Roberts
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ec78d54f37
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Removed old Index typedef and IndexFormatter
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2013-11-08 16:35:28 +00:00 |
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Richard Roberts
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69c7f6d137
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Restored ClusterTree base class of JunctionTree
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2013-10-09 17:39:19 +00:00 |
Alex Cunningham
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90ddac8fac
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Added a print function to the BayesTreeCliqueWrapper that also prints out contents
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2013-09-10 19:26:02 +00:00 |
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Richard Roberts
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e2733d9899
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Fixed serialization problems with tbb data structures
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2013-08-16 04:10:29 +00:00 |
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Richard Roberts
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bd89c5fd45
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Using FastVector (with tbb allocator) instead of vector
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2013-08-15 17:21:20 +00:00 |
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Richard Roberts
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5b4f61171f
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Changed back to fastmap to fix serialization
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2013-08-15 14:24:21 +00:00 |
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Richard Roberts
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174c2da7d9
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Switched a couple of data structures - ISAM2::Nodes and Scatter, to tbb versions for better performance
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2013-08-14 22:54:00 +00:00 |
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Richard Roberts
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f73db8847b
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Fixed bottleneck in reelimination with orphans
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2013-08-12 03:57:17 +00:00 |
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Richard Roberts
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356351db75
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Removed unused addClique function
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2013-08-09 21:35:39 +00:00 |
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Richard Roberts
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375f7c16e6
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Working on fixing ISAM
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2013-08-06 19:56:48 +00:00 |
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Alex Cunningham
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dde245ef3b
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Merging
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2013-08-06 17:50:49 +00:00 |
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Richard Roberts
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1424c01fa9
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Renamed all typedefs of specific EliminationTraits to EliminationTraitsType to avoid name problem on GCC
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2013-08-06 17:09:20 +00:00 |
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Richard Roberts
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0e80fe6418
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Moved ordering tests, fixed serialization and constructors, to make all inference, symbolic, and linear tests pass
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2013-08-05 22:31:09 +00:00 |
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Richard Roberts
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79a3b8dd30
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Derive BayesTreeOrphanWrapper from conditional instead of factor
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2013-08-01 21:57:18 +00:00 |
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Richard Roberts
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60d5feb5cf
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Working on ISAM
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2013-07-29 23:56:04 +00:00 |
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Richard Roberts
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3ade190128
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Renamed old classes to "Ordered" and removed "Unordered" name from new classes
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2013-07-29 23:55:40 +00:00 |
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Alex Cunningham
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228a26947f
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Removed checkConsistency() from BayesTree
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2013-05-22 17:27:44 +00:00 |
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Alex Cunningham
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41b0b90376
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Added nrNodes() and checkConsistency() to BayesTree
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2013-05-22 17:27:42 +00:00 |
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Richard Roberts
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eeef9eab32
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Generating config.h file in CMake with quaternion mode flag, dataset paths. Also added CMake option to use system-installed Eigen, which works by generating a global eigen include file containing the corresponding include paths.
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2013-04-25 15:57:15 +00:00 |
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Richard Roberts
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67e36febf2
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Added DLL export annotations on new code
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2013-04-01 19:29:53 +00:00 |
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Richard Roberts
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229e2d9195
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Added BayesTree::removeSubtree
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2013-03-18 19:27:59 +00:00 |
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Richard Roberts
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d88ed78bb3
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Made BayesTree::Cliques a FastList instead of an std::list
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2013-03-18 19:27:56 +00:00 |
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Alex Cunningham
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eed9cf1e5c
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Fixed permutation function in BayesTree to properly update the nodes listing. Added assertion to removeClique() to fail under malformed bayes trees.
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2013-02-18 18:26:36 +00:00 |
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Richard Roberts
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9a23c2936a
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Merge remote-tracking branch 'refs/remotes/svn/trunk' into isam2-chain-optimization
Conflicts:
gtsam/linear/VectorValues.h
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2013-02-04 22:53:02 +00:00 |
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Alex Cunningham
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059a2c1b97
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Added matlab interface to access cliques by index from BayesTree
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2013-02-04 17:55:55 +00:00 |
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Alex Cunningham
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d1246bfe98
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Added empty() to BayesTree
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2013-01-27 20:12:22 +00:00 |
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Richard Roberts
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06f836c0a7
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Using vector instead of deque in VariableIndex, BayesTree::Nodes, and GaussianISAM::Dims. In practice it appears to be faster due to smart reallocation strategies (still need to investigate whether we should use reserve, resize, or neither).
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2012-11-23 23:22:46 +00:00 |
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Richard Roberts
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4d4e17c2a7
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Joint marginals using lowest-common-ancestor shortcuts. As part of this commit, caching of shortcuts is removed, the BayesTreeCliqueBase::marginal function computing single-variable shortcut marginals is removed, and the factor/frontal size checks in symbolic and discrete elimination are modified to permit eliminating empty factors or zero frontal variables.
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2012-10-28 06:21:21 +00:00 |
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Richard Roberts
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df9a86d340
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Fixed typo/spelling (hopefully for the last time)
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2012-10-09 00:14:42 +00:00 |
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Richard Roberts
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e52b6efb68
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Fixed typo/spelling
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2012-10-08 23:27:39 +00:00 |
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Alex Cunningham
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82593a2432
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Added conversion functions from Fast* classes to stl containers. Added permuteWithInverse() to BayesTree
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2012-10-08 20:30:59 +00:00 |
Chris Beall
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4297d24c96
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changed tabs to spaces for consistent indentation in all of GTSAM
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2012-10-02 14:40:07 +00:00 |
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Alex Cunningham
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df2a6bfdee
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Added reporting functions for counting number of cached shortcuts/separatorMarginals in BayesTree
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2012-09-21 20:57:30 +00:00 |
Frank Dellaert
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7fcd06bb4f
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BayesTree::marginalFactor now calls Clique::marginal2, which in turn calles the new function Clique::separatorMarginal. This calculates marginals with a much simpler recursion, using the parent separator marginal. This could be faster than the shortcut way, especially if separator sizes are small and the root clique is large. The cached marginals have to be discarded when the bayes tree is updated, but this is no different from shortcuts to the root.
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2012-09-17 14:03:54 +00:00 |
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Frank Dellaert
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1f0cc0aaa4
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2-variable joint marginals computed with shortcuts are buggy: they only work if the cliques are disjoint or one of them is the root. They now throw an exception if that is the case.
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2012-09-17 03:31:24 +00:00 |
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Alex Cunningham
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684af98249
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Added function to manually clear shortcut caches in a bayes tree
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2012-09-10 20:07:59 +00:00 |
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Alex Cunningham
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2657f04bec
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Added clone() to BayesTree to allow for full inheritance, wrapped GaussianBayesTree and made GaussianISAM inherit from GaussianBayesTree
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2012-09-10 17:00:02 +00:00 |
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Frank Dellaert
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3e8544880a
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Fixed confusing variable naming, e.g. Index key -> Index j
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2012-09-08 04:21:21 +00:00 |
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Alex Cunningham
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d7f6a79967
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Refactor in GaussianISAM to make solver easier to use/modify. Added non-const interface to nodes in Bayes Tree. Added separate eclipse make target for check (with default -j params) and "check j1" to force -j params.
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2012-08-12 19:52:20 +00:00 |
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Richard Roberts
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1565833c2c
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More consistent order of private/protected/public - typedefs, private/protected variables, public interface, private/protected functions
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2012-08-06 21:42:26 +00:00 |
Stephen Williams
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98aa3b0627
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In BayesTree, return a const reference to the 'nodes' structure, instead of a copy
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2012-08-01 21:07:50 +00:00 |
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Richard Roberts
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947e5fe5ee
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Made typedefs / constants for IndexFormatter to simplify code
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2012-06-28 01:52:48 +00:00 |
Yong-Dian Jian
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7a9dd715e7
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print statistics for bayesnet and bayestree
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2012-06-27 16:33:19 +00:00 |
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Alex Cunningham
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c7734db4fa
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Added formatting objects to linear and inference objects to allow for printing meaningful keys
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2012-06-25 21:19:38 +00:00 |
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Chris Beall
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aae88032ea
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fixed compiler error for gcc 4.2 on Mac OS
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2012-06-25 16:12:32 +00:00 |