221 lines
6.8 KiB
C++
221 lines
6.8 KiB
C++
/* ----------------------------------------------------------------------------
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* GTSAM Copyright 2010, Georgia Tech Research Corporation,
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* Atlanta, Georgia 30332-0415
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* All Rights Reserved
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* Authors: Frank Dellaert, et al. (see THANKS for the full author list)
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* See LICENSE for the license information
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* -------------------------------------------------------------------------- */
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/**
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* @file TableDistribution.h
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* @date Dec 22, 2024
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* @author Varun Agrawal
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*/
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#pragma once
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#include <gtsam/discrete/DiscreteConditional.h>
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#include <gtsam/discrete/Signature.h>
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#include <gtsam/discrete/TableFactor.h>
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#include <gtsam/inference/Conditional-inst.h>
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#include <memory>
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#include <string>
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#include <vector>
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namespace gtsam {
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/**
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* Discrete Conditional Density which uses a SparseVector as the internal
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* representation, similar to the TableFactor.
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*
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* @ingroup discrete
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*/
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class GTSAM_EXPORT TableDistribution : public DiscreteConditional {
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private:
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TableFactor table_;
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typedef Eigen::SparseVector<double>::InnerIterator SparseIt;
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public:
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// typedefs needed to play nice with gtsam
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typedef TableDistribution This; ///< Typedef to this class
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typedef std::shared_ptr<This> shared_ptr; ///< shared_ptr to this class
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typedef DiscreteConditional
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BaseConditional; ///< Typedef to our conditional base class
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using Values = DiscreteValues; ///< backwards compatibility
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/// @name Standard Constructors
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/// @{
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/// Default constructor needed for serialization.
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TableDistribution() {}
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/// Construct from factor, taking the first `nFrontals` keys as frontals.
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TableDistribution(size_t nFrontals, const TableFactor& f);
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/**
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* Construct from DiscreteKeys and SparseVector, taking the first
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* `nFrontals` keys as frontals, in the order given.
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*/
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TableDistribution(size_t nFrontals, const DiscreteKeys& keys,
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const Eigen::SparseVector<double>& potentials);
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/** Construct from signature */
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explicit TableDistribution(const Signature& signature);
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/**
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* Construct from key, parents, and a Signature::Table specifying the
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* conditional probability table (CPT) in 00 01 10 11 order. For
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* three-valued, it would be 00 01 02 10 11 12 20 21 22, etc....
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*
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* Example: TableDistribution P(D, {B,E}, table);
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*/
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TableDistribution(const DiscreteKey& key, const DiscreteKeys& parents,
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const Signature::Table& table)
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: TableDistribution(Signature(key, parents, table)) {}
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/**
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* Construct from key, parents, and a vector<double> specifying the
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* conditional probability table (CPT) in 00 01 10 11 order. For
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* three-valued, it would be 00 01 02 10 11 12 20 21 22, etc....
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*
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* Example: TableDistribution P(D, {B,E}, table);
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*/
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TableDistribution(const DiscreteKey& key, const DiscreteKeys& parents,
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const std::vector<double>& table)
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: TableDistribution(
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1, TableFactor(DiscreteKeys{key} & parents, table)) {}
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/**
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* Construct from key, parents, and a string specifying the conditional
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* probability table (CPT) in 00 01 10 11 order. For three-valued, it would
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* be 00 01 02 10 11 12 20 21 22, etc....
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*
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* The string is parsed into a Signature::Table.
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*
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* Example: TableDistribution P(D, {B,E}, "9/1 2/8 3/7 1/9");
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*/
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TableDistribution(const DiscreteKey& key, const DiscreteKeys& parents,
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const std::string& spec)
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: TableDistribution(Signature(key, parents, spec)) {}
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/// No-parent specialization; can also use DiscreteDistribution.
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TableDistribution(const DiscreteKey& key, const std::string& spec)
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: TableDistribution(Signature(key, {}, spec)) {}
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/**
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* @brief construct P(X|Y) = f(X,Y)/f(Y) from f(X,Y) and f(Y)
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* Assumes but *does not check* that f(Y)=sum_X f(X,Y).
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*/
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TableDistribution(const TableFactor& joint,
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const TableFactor& marginal);
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/**
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* @brief construct P(X|Y) = f(X,Y)/f(Y) from f(X,Y) and f(Y)
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* Assumes but *does not check* that f(Y)=sum_X f(X,Y).
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* Makes sure the keys are ordered as given. Does not check orderedKeys.
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*/
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TableDistribution(const TableFactor& joint,
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const TableFactor& marginal,
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const Ordering& orderedKeys);
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/**
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* @brief Combine two conditionals, yielding a new conditional with the union
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* of the frontal keys, ordered by gtsam::Key.
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*
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* The two conditionals must make a valid Bayes net fragment, i.e.,
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* the frontal variables cannot overlap, and must be acyclic:
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* Example of correct use:
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* P(A,B) = P(A|B) * P(B)
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* P(A,B|C) = P(A|B) * P(B|C)
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* P(A,B,C) = P(A,B|C) * P(C)
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* Example of incorrect use:
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* P(A|B) * P(A|C) = ?
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* P(A|B) * P(B|A) = ?
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* We check for overlapping frontals, but do *not* check for cyclic.
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*/
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TableDistribution operator*(
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const TableDistribution& other) const;
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/// @}
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/// @name Testable
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/// @{
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/// GTSAM-style print
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void print(
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const std::string& s = "Discrete Conditional: ",
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const KeyFormatter& formatter = DefaultKeyFormatter) const override;
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/// GTSAM-style equals
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bool equals(const DiscreteFactor& other, double tol = 1e-9) const override;
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/// @}
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/// @name Standard Interface
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/// @{
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/// Return the underlying TableFactor
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TableFactor table() const { return table_; }
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using BaseConditional::evaluate; // HybridValues version
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/// Evaluate the conditional given the values.
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virtual double evaluate(const Assignment<Key>& values) const override {
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return table_.evaluate(values);
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}
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/**
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* @brief Create new conditional by maximizing over all
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* values with the same separator.
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*
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* @param keys The keys to sum over.
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* @return DiscreteConditional::shared_ptr
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*/
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virtual DiscreteConditional::shared_ptr max(
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const Ordering& keys) const override;
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/// @}
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/// @name Advanced Interface
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/// @{
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/// Set the underlying data from the DiscreteConditional
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virtual void setData(const DiscreteConditional::shared_ptr& dc) override;
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/// Prune the conditional
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virtual DiscreteConditional::shared_ptr prune(
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size_t maxNrAssignments) const override;
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/// Get a DecisionTreeFactor representation.
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DecisionTreeFactor toDecisionTreeFactor() const override {
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return table_.toDecisionTreeFactor();
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}
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/// Get the number of non-zero values.
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size_t nrValues() const { return table_.sparseTable().nonZeros(); }
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/// @}
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private:
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#if GTSAM_ENABLE_BOOST_SERIALIZATION
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/** Serialization function */
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friend class boost::serialization::access;
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template <class Archive>
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void serialize(Archive& ar, const unsigned int /*version*/) {
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ar& BOOST_SERIALIZATION_BASE_OBJECT_NVP(BaseConditional);
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ar& BOOST_SERIALIZATION_NVP(table_);
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}
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#endif
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};
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// TableDistribution
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// traits
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template <>
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struct traits<TableDistribution>
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: public Testable<TableDistribution> {};
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} // namespace gtsam
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