# Check Cython version, need to be >=0.25.2 # Unset these cached variables to avoid surprises when the python/cython # in the current environment are different from the cached! unset(PYTHON_EXECUTABLE CACHE) unset(CYTHON_EXECUTABLE CACHE) find_package(Cython 0.25.2 REQUIRED) # Set up cache options set(GTSAM_CYTHON_INSTALL_PATH "" CACHE PATH "Cython toolbox destination, blank defaults to CMAKE_INSTALL_PREFIX/cython") if(NOT GTSAM_CYTHON_INSTALL_PATH) set(GTSAM_CYTHON_INSTALL_PATH "${CMAKE_INSTALL_PREFIX}/cython") endif() # User-friendly Cython wrapping and installing function. # Builds a Cython module from the provided interface_header. # For example, for the interface header gtsam.h, # this will build the wrap module 'gtsam'. # # Arguments: # # interface_header: The relative path to the wrapper interface definition file. # extra_imports: extra header to import in the Cython pxd file. # For example, to use Cython gtsam.pxd in your own module, # use "from gtsam cimport *" # install_path: destination to install the library # libs: libraries to link with # dependencies: Dependencies which need to be built before the wrapper function(wrap_and_install_library_cython interface_header extra_imports install_path libs dependencies) # Paths for generated files get_filename_component(module_name "${interface_header}" NAME_WE) set(generated_files_path "${PROJECT_BINARY_DIR}/cython/${module_name}") wrap_library_cython("${interface_header}" "${generated_files_path}" "${extra_imports}" "${libs}" "${dependencies}") install_cython_wrapped_library("${interface_header}" "${generated_files_path}" "${install_path}") endfunction() function(set_up_required_cython_packages) # Set up building of cython module find_package(PythonLibs 2.7 REQUIRED) include_directories(${PYTHON_INCLUDE_DIRS}) find_package(NumPy REQUIRED) include_directories(${NUMPY_INCLUDE_DIRS}) endfunction() # Convert pyx to cpp by executing cython # This is the first step to compile cython from the command line # as described at: http://cython.readthedocs.io/en/latest/src/reference/compilation.html # # Arguments: # - target: The specified target for this step # - pyx_file: The input pyx_file in full *absolute* path # - generated_cpp: The output cpp file in full absolute path # - include_dirs: Directories to include when executing cython function(pyx_to_cpp target pyx_file generated_cpp include_dirs) foreach(dir ${include_dirs}) set(includes_for_cython ${includes_for_cython} -I ${dir}) endforeach() add_custom_command( OUTPUT ${generated_cpp} COMMAND cython --cplus ${includes_for_cython} ${pyx_file} -o ${generated_cpp} VERBATIM) add_custom_target(${target} ALL DEPENDS ${generated_cpp}) endfunction() # Build the cpp file generated by converting pyx using cython # This is the second step to compile cython from the command line # as described at: http://cython.readthedocs.io/en/latest/src/reference/compilation.html # # Arguments: # - target: The specified target for this step # - cpp_file: The input cpp_file in full *absolute* path # - output_lib_we: The output lib filename only (without extension) # - output_dir: The output directory function(build_cythonized_cpp target cpp_file output_lib_we output_dir) add_library(${target} MODULE ${cpp_file}) set_target_properties(${target} PROPERTIES LINK_FLAGS "-undefined dynamic_lookup" OUTPUT_NAME ${output_lib_we} PREFIX "" LIBRARY_OUTPUT_DIRECTORY ${output_dir}) endfunction() # Cythonize a pyx from the command line as described at # http://cython.readthedocs.io/en/latest/src/reference/compilation.html # Arguments: # - target: The specified target # - pyx_file: The input pyx_file in full *absolute* path # - output_lib_we: The output lib filename only (without extension) # - output_dir: The output directory # - include_dirs: Directories to include when executing cython # - libs: Libraries to link with # - dependencies: Other target dependencies function(cythonize target pyx_file output_lib_we output_dir include_dirs libs dependencies) get_filename_component(pyx_path "${pyx_file}" DIRECTORY) get_filename_component(pyx_name "${pyx_file}" NAME_WE) set(generated_cpp "${output_dir}/${pyx_name}.cpp") set_up_required_cython_packages() pyx_to_cpp(${target}_pyx2cpp ${pyx_file} ${generated_cpp} "${include_dirs}") if (NOT "${dependencies}" STREQUAL "") add_dependencies(${target}_pyx2cpp "${dependencies}") endif() build_cythonized_cpp(${target} ${generated_cpp} ${output_lib_we} ${output_dir}) if (NOT "${libs}" STREQUAL "") target_link_libraries(${target} "${libs}") endif() add_dependencies(${target} ${target}_pyx2cpp) endfunction() # Internal function that wraps a library and compiles the wrapper function(wrap_library_cython interface_header generated_files_path extra_imports libs dependencies) # Wrap codegen interface # Extract module path and name from interface header file name # wrap requires interfacePath to be *absolute* get_filename_component(interface_header "${interface_header}" ABSOLUTE) get_filename_component(module_path "${interface_header}" PATH) get_filename_component(module_name "${interface_header}" NAME_WE) # Wrap module to Cython pyx message(STATUS "Cython wrapper generating ${module_name}.pyx") set(generated_pyx "${generated_files_path}/${module_name}.pyx") file(MAKE_DIRECTORY "${generated_files_path}") add_custom_command( OUTPUT ${generated_pyx} DEPENDS ${interface_header} wrap COMMAND wrap --cython ${module_path} ${module_name} ${generated_files_path} "${extra_imports}" VERBATIM WORKING_DIRECTORY ${generated_files_path}/../) add_custom_target(cython_wrap_${module_name}_pyx ALL DEPENDS ${generated_pyx}) if(NOT ${dependencies} STREQUAL "") add_dependencies(cython_wrap_${module_name}_pyx ${dependencies}) endif() message(STATUS "Cythonize and build ${module_name}.pyx") get_property(include_dirs DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR} PROPERTY INCLUDE_DIRECTORIES) cythonize(${module_name}_cython ${generated_pyx} ${module_name} ${generated_files_path} "${include_dirs}" "${libs}" cython_wrap_${module_name}_pyx) # distclean add_custom_target(wrap_${module_name}_cython_distclean COMMAND cmake -E remove_directory ${generated_files_path}) endfunction() # Internal function that installs a wrap toolbox function(install_cython_wrapped_library interface_header generated_files_path install_path) get_filename_component(module_name "${interface_header}" NAME_WE) # NOTE: only installs .pxd and .pyx and binary files (not .cpp) - the trailing slash on the directory name # here prevents creating the top-level module name directory in the destination. message(STATUS "Installing Cython Toolbox to ${install_path}") #${GTSAM_CYTHON_INSTALL_PATH}") if(GTSAM_BUILD_TYPE_POSTFIXES) foreach(build_type ${CMAKE_CONFIGURATION_TYPES}) string(TOUPPER "${build_type}" build_type_upper) if(${build_type_upper} STREQUAL "RELEASE") set(build_type_tag "") # Don't create release mode tag on installed directory else() set(build_type_tag "${build_type}") endif() # Split up filename to strip trailing '/' in GTSAM_CYTHON_INSTALL_PATH if there is one get_filename_component(location "${install_path}" PATH) get_filename_component(name "${install_path}" NAME) install(DIRECTORY "${generated_files_path}/" DESTINATION "${location}/${name}${build_type_tag}" CONFIGURATIONS "${build_type}" PATTERN "build" EXCLUDE PATTERN "CMakeFiles" EXCLUDE PATTERN "Makefile" EXCLUDE PATTERN "*.cmake" EXCLUDE PATTERN "*.cpp" EXCLUDE PATTERN "*.py" EXCLUDE) endforeach() else() install(DIRECTORY "${generated_files_path}/" DESTINATION ${install_path} PATTERN "build" EXCLUDE PATTERN "CMakeFiles" EXCLUDE PATTERN "Makefile" EXCLUDE PATTERN "*.cmake" EXCLUDE PATTERN "*.cpp" EXCLUDE PATTERN "*.py" EXCLUDE) endif() endfunction() # Helper function to install Cython scripts and handle multiple build types where the scripts # should be installed to all build type toolboxes # # Arguments: # source_directory: The source directory to be installed. "The last component of each directory # name is appended to the destination directory but a trailing slash may be # used to avoid this because it leaves the last component empty." # (https://cmake.org/cmake/help/v3.3/command/install.html?highlight=install#installing-directories) # dest_directory: The destination directory to install to. # patterns: list of file patterns to install function(install_cython_scripts source_directory dest_directory patterns) set(patterns_args "") set(exclude_patterns "") foreach(pattern ${patterns}) list(APPEND patterns_args PATTERN "${pattern}") endforeach() if(GTSAM_BUILD_TYPE_POSTFIXES) foreach(build_type ${CMAKE_CONFIGURATION_TYPES}) string(TOUPPER "${build_type}" build_type_upper) if(${build_type_upper} STREQUAL "RELEASE") set(build_type_tag "") # Don't create release mode tag on installed directory else() set(build_type_tag "${build_type}") endif() # Split up filename to strip trailing '/' in GTSAM_CYTHON_INSTALL_PATH if there is one get_filename_component(location "${dest_directory}" PATH) get_filename_component(name "${dest_directory}" NAME) install(DIRECTORY "${source_directory}" DESTINATION "${location}/${name}${build_type_tag}" CONFIGURATIONS "${build_type}" FILES_MATCHING ${patterns_args} PATTERN "${exclude_patterns}" EXCLUDE) endforeach() else() install(DIRECTORY "${source_directory}" DESTINATION "${dest_directory}" FILES_MATCHING ${patterns_args} PATTERN "${exclude_patterns}" EXCLUDE) endif() endfunction() # Helper function to install specific files and handle multiple build types where the scripts # should be installed to all build type toolboxes # # Arguments: # source_files: The source files to be installed. # dest_directory: The destination directory to install to. function(install_cython_files source_files dest_directory) if(GTSAM_BUILD_TYPE_POSTFIXES) foreach(build_type ${CMAKE_CONFIGURATION_TYPES}) string(TOUPPER "${build_type}" build_type_upper) if(${build_type_upper} STREQUAL "RELEASE") set(build_type_tag "") # Don't create release mode tag on installed directory else() set(build_type_tag "${build_type}") endif() # Split up filename to strip trailing '/' in GTSAM_CYTHON_INSTALL_PATH if there is one get_filename_component(location "${dest_directory}" PATH) get_filename_component(name "${dest_directory}" NAME) install(FILES "${source_files}" DESTINATION "${location}/${name}${build_type_tag}" CONFIGURATIONS "${build_type}") endforeach() else() install(FILES "${source_files}" DESTINATION "${dest_directory}") endif() endfunction()