ccolamd now installs and works with gtsam - all tests pass
Alex Cunningham
parent
2d0984e9b4
commit
e9b8a48c43
35
configure.ac
35
configure.ac
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@ -16,8 +16,10 @@ AC_CONFIG_SRCDIR([gtsam/slam/pose2SLAM.cpp])
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AC_CONFIG_SRCDIR([tests/testTupleValues.cpp])
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AC_CONFIG_SRCDIR([examples/SimpleRotation.cpp])
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# pull in all subdirectories of Eigen - FIXME: find a better way of handling this
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AC_CONFIG_SRCDIR([gtsam/3rdparty/Makefile.am])
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AC_CONFIG_SRCDIR([gtsam/3rdparty/ccolamd/Makefile.am])
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# pull in all subdirectories of Eigen - FIXME: find a better way of handling this
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AC_CONFIG_SRCDIR([gtsam/3rdparty/Eigen/Makefile.am])
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AC_CONFIG_SRCDIR([gtsam/3rdparty/Eigen/src/Makefile.am])
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AC_CONFIG_SRCDIR([gtsam/3rdparty/Eigen/src/Cholesky/Makefile.am])
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@ -140,21 +142,21 @@ AX_BOOST_BASE([1.40])
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# ])
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#AC_SUBST([boost])
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# ask for ccolamd library include directory
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AC_ARG_WITH([ccolamd-inc],
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[AS_HELP_STRING([--with-ccolamd-inc],
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[specify the CCOLAMD library include directory (defaults to /HOME/include/ccolamd)])],
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[CCOLAMDInc=$withval],
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[CCOLAMDInc=${HOME}/include/ccolamd])
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AC_SUBST([CCOLAMDInc])
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# ask for sparse library lib directory
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AC_ARG_WITH([ccolamd-lib],
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[AS_HELP_STRING([--with-ccolamd-lib],
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[specify the CCOLAMD library lib directory (defaults to /HOME/lib)])],
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[CCOLAMDLib=$withval],
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[CCOLAMDLib=${HOME}/lib])
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AC_SUBST([CCOLAMDLib])
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## ask for ccolamd library include directory
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#AC_ARG_WITH([ccolamd-inc],
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# [AS_HELP_STRING([--with-ccolamd-inc],
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# [specify the CCOLAMD library include directory (defaults to /HOME/include/ccolamd)])],
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# [CCOLAMDInc=$withval],
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# [CCOLAMDInc=${HOME}/include/ccolamd])
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#AC_SUBST([CCOLAMDInc])
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#
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## ask for sparse library lib directory
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#AC_ARG_WITH([ccolamd-lib],
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# [AS_HELP_STRING([--with-ccolamd-lib],
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# [specify the CCOLAMD library lib directory (defaults to /HOME/lib)])],
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# [CCOLAMDLib=$withval],
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# [CCOLAMDLib=${HOME}/lib])
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#AC_SUBST([CCOLAMDLib])
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AC_CONFIG_FILES([CppUnitLite/Makefile \
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gtsam/3rdparty/Eigen/src/Cholesky/Makefile \
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@ -183,6 +185,7 @@ gtsam/3rdparty/Eigen/src/Eigen2Support/Makefile \
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gtsam/3rdparty/Eigen/src/Eigen2Support/Geometry/Makefile \
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gtsam/3rdparty/Eigen/src/Makefile \
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gtsam/3rdparty/Eigen/Makefile \
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gtsam/3rdparty/ccolamd/Makefile \
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gtsam/3rdparty/Makefile \
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gtsam/base/Makefile \
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gtsam/geometry/Makefile \
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@ -22,7 +22,7 @@ SUBDIRS = vSLAMexample # visual SLAM examples with 3D point landmarks and 6D cam
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#----------------------------------------------------------------------------------------------------
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# rules to build local programs
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#----------------------------------------------------------------------------------------------------
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AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
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AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
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AM_LDFLAGS = $(BOOST_LDFLAGS)
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LDADD = ../gtsam/libgtsam.la
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AM_DEFAULT_SOURCE_EXT = .cpp
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@ -28,7 +28,7 @@ dist-hook:
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#----------------------------------------------------------------------------------------------------
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# rules to build local programs
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#----------------------------------------------------------------------------------------------------
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AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
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AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
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AM_LDFLAGS = $(BOOST_LDFLAGS)
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LDADD = ../../gtsam/libgtsam.la
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AM_DEFAULT_SOURCE_EXT = .cpp
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@ -1,8 +1,7 @@
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# 3rd Party libraries to be built and installed along with gtsam
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# All the sub-directories that need to be built
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SUBDIRS = Eigen
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SUBDIRS = Eigen ccolamd
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# And the corresponding libraries produced
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# TODO add sublibs when something in 3rdparty actually needs compilation
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# SUBLIBS =
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SUBLIBS = ccolamd/libccolamd.la
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@ -1,3 +1,14 @@
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Changes for GTSAM Distribution
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June 2, 2011:
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* Moved all source/header files into a single folder within gtsam/3rdparty
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* Removed demos, matlab examples, original makefiles
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* Added UFconfig.[c|h] from the UFconfig suitesparse package
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* Renamed licence file to LGPL.txt - contents remain the same
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* All code is unchanged from original
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Original ChangeLog by authors
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Jan 25, 2011: version 2.7.3
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* minor fix to "make install"
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@ -1,32 +0,0 @@
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#-------------------------------------------------------------------------------
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# CCOLAMD Makefile
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#-------------------------------------------------------------------------------
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default: libccolamd.a
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include ../../UFconfig/UFconfig.mk
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I = -I../Include -I../../UFconfig
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INC = ../Include/ccolamd.h ../../UFconfig/UFconfig.h
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SRC = ../Source/ccolamd.c ../Source/ccolamd_global.c
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# creates libccolamd.a, a C-callable COLAMD library
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libccolamd.a: $(SRC) $(INC)
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$(CC) $(CFLAGS) $(I) -c ../Source/ccolamd_global.c
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$(CC) $(CFLAGS) $(I) -c ../Source/ccolamd.c
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$(CC) $(CFLAGS) $(I) -c ../Source/ccolamd.c -DDLONG -o ccolamd_l.o
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$(AR) libccolamd.a ccolamd.o ccolamd_l.o ccolamd_global.o
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ccode: libccolamd.a
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library: libccolamd.a
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clean:
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- $(RM) $(CLEAN)
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purge: distclean
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distclean: clean
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- $(RM) libccolamd.a
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@ -0,0 +1,30 @@
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#----------------------------------------------------------------------------------------------------
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# GTSAM 3rdparty: CCOLAMD
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# Tim Davis' sparse library for column ordering - part of suitesparse
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#----------------------------------------------------------------------------------------------------
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# use nostdinc to turn off -I. and -I.., we do not need them because
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# header files are qualified so they can be included in external projects.
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AUTOMAKE_OPTIONS = nostdinc
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headers =
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sources =
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# CCOLAMD (with UFconfig files included)
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headers += ccolamd.h UFconfig.h
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sources += ccolamd.c ccolamd_global.c UFconfig.c
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#----------------------------------------------------------------------------------------------------
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# Create a libtool library that is not installed
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# It will be packaged in the toplevel libgtsam.la as specfied in ../Makefile.am
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# The headers are installed in $(includedir)/gtsam/3rdparty:
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#----------------------------------------------------------------------------------------------------
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ccolamddir = $(pkgincludedir)/3rdparty/ccolamd
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ccolamd_HEADERS = $(headers)
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noinst_LTLIBRARIES = libccolamd.la
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libccolamd_la_SOURCES = $(sources)
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AM_CPPFLAGS =
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AM_CPPFLAGS += $(BOOST_CPPFLAGS) -I$(top_srcdir) -DDLONG
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AM_LDFLAGS = $(BOOST_LDFLAGS)
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@ -1,386 +0,0 @@
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#===============================================================================
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# UFconfig.mk: common configuration file for the SuiteSparse
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#===============================================================================
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# This file contains all configuration settings for all packages authored or
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# co-authored by Tim Davis at the University of Florida:
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#
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# Package Version Description
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# ------- ------- -----------
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# AMD 1.2 or later approximate minimum degree ordering
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# COLAMD 2.4 or later column approximate minimum degree ordering
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# CCOLAMD 1.0 or later constrained column approximate minimum degree ordering
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# CAMD any constrained approximate minimum degree ordering
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# UMFPACK 4.5 or later sparse LU factorization, with the BLAS
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# CHOLMOD any sparse Cholesky factorization, update/downdate
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# KLU 0.8 or later sparse LU factorization, BLAS-free
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# BTF 0.8 or later permutation to block triangular form
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# LDL 1.2 or later concise sparse LDL'
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# LPDASA any linear program solve (dual active set algorithm)
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# CXSparse any extended version of CSparse (int/long, real/complex)
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# SuiteSparseQR any sparse QR factorization
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#
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# The UFconfig directory and the above packages should all appear in a single
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# directory, in order for the Makefile's within each package to find this file.
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#
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# To enable an option of the form "# OPTION = ...", edit this file and
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# delete the "#" in the first column of the option you wish to use.
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#------------------------------------------------------------------------------
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# Generic configuration
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#------------------------------------------------------------------------------
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# C compiler and compiler flags: These will normally not give you optimal
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# performance. You should select the optimization parameters that are best
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# for your system. On Linux, use "CFLAGS = -O3 -fexceptions" for example.
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CC = cc
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CFLAGS = -O3 -fexceptions
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# C++ compiler (also uses CFLAGS)
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CPLUSPLUS = g++
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# ranlib, and ar, for generating libraries
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RANLIB = ranlib
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AR = ar cr
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# copy, delete, and rename a file
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CP = cp -f
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RM = rm -f
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MV = mv -f
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# Fortran compiler (not normally required)
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F77 = f77
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F77FLAGS = -O
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F77LIB =
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# C and Fortran libraries
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LIB = -lm
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# For compiling MATLAB mexFunctions (MATLAB 7.5 or later)
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MEX = mex -O -largeArrayDims -lmwlapack -lmwblas
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# For compiling MATLAB mexFunctions (MATLAB 7.3 and 7.4)
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# MEX = mex -O -largeArrayDims -lmwlapack
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# For MATLAB 7.2 or earlier, you must use one of these options:
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# MEX = mex -O -lmwlapack
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# MEX = mex -O
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# Which version of MAKE you are using (default is "make")
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# MAKE = make
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# MAKE = gmake
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# For "make install"
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INSTALL_LIB = /usr/local/lib
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INSTALL_INCLUDE = /usr/local/include
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#------------------------------------------------------------------------------
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# BLAS and LAPACK configuration:
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#------------------------------------------------------------------------------
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# UMFPACK and CHOLMOD both require the BLAS. CHOLMOD also requires LAPACK.
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# See Kazushige Goto's BLAS at http://www.cs.utexas.edu/users/flame/goto/ or
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# http://www.tacc.utexas.edu/~kgoto/ for the best BLAS to use with CHOLMOD.
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# LAPACK is at http://www.netlib.org/lapack/ . You can use the standard
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# Fortran LAPACK along with Goto's BLAS to obtain very good performance.
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# CHOLMOD gets a peak numeric factorization rate of 3.6 Gflops on a 3.2 GHz
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# Pentium 4 (512K cache, 4GB main memory) with the Goto BLAS, and 6 Gflops
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# on a 2.5Ghz dual-core AMD Opteron.
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# These settings will probably not work, since there is no fixed convention for
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# naming the BLAS and LAPACK library (*.a or *.so) files.
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# This is probably slow ... it might connect to the Standard Reference BLAS:
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BLAS = -lblas -lgfortran
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LAPACK = -llapack
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# NOTE: this next option for the "Goto BLAS" has nothing to do with a "goto"
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# statement. Rather, the Goto BLAS is written by Dr. Kazushige Goto.
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# Using the Goto BLAS:
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# BLAS = -lgoto -lgfortran -lgfortranbegin
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# Using non-optimized versions:
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# BLAS = -lblas_plain -lgfortran -lgfortranbegin
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# LAPACK = -llapack_plain
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# BLAS = -lblas_plain -lgfortran -lgfortranbegin
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# LAPACK = -llapack
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# The BLAS might not contain xerbla, an error-handling routine for LAPACK and
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# the BLAS. Also, the standard xerbla requires the Fortran I/O library, and
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# stops the application program if an error occurs. A C version of xerbla
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# distributed with this software (UFconfig/xerbla/libcerbla.a) includes a
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# Fortran-callable xerbla routine that prints nothing and does not stop the
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# application program. This is optional.
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# XERBLA = ../../UFconfig/xerbla/libcerbla.a
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# If you wish to use the XERBLA in LAPACK and/or the BLAS instead,
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# use this option:
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XERBLA =
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# If you wish to use the Fortran UFconfig/xerbla/xerbla.f instead, use this:
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# XERBLA = ../../UFconfig/xerbla/libxerbla.a
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#------------------------------------------------------------------------------
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# METIS, optionally used by CHOLMOD
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#------------------------------------------------------------------------------
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# If you do not have METIS, or do not wish to use it in CHOLMOD, you must
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# compile CHOLMOD with the -DNPARTITION flag. You must also use the
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# "METIS =" option, below.
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# The path is relative to where it is used, in CHOLMOD/Lib, CHOLMOD/MATLAB, etc.
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# You may wish to use an absolute path. METIS is optional. Compile
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# CHOLMOD with -DNPARTITION if you do not wish to use METIS.
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METIS_PATH = ../../metis-4.0
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METIS = ../../metis-4.0/libmetis.a
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# If you use CHOLMOD_CONFIG = -DNPARTITION then you must use the following
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# options:
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# METIS_PATH =
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# METIS =
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#------------------------------------------------------------------------------
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# UMFPACK configuration:
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#------------------------------------------------------------------------------
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# Configuration flags for UMFPACK. See UMFPACK/Source/umf_config.h for details.
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#
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# -DNBLAS do not use the BLAS. UMFPACK will be very slow.
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# -D'LONGBLAS=long' or -DLONGBLAS='long long' defines the integers used by
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# LAPACK and the BLAS (defaults to 'int')
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# -DNSUNPERF do not use the Sun Perf. Library (default is use it on Solaris)
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# -DNPOSIX do not use POSIX routines sysconf and times.
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# -DGETRUSAGE use getrusage
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# -DNO_TIMER do not use any timing routines
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# -DNRECIPROCAL do not multiply by the reciprocal
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# -DNO_DIVIDE_BY_ZERO do not divide by zero
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UMFPACK_CONFIG =
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#------------------------------------------------------------------------------
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# CHOLMOD configuration
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#------------------------------------------------------------------------------
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# CHOLMOD Library Modules, which appear in libcholmod.a:
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# Core requires: none
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# Check requires: Core
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# Cholesky requires: Core, AMD, COLAMD. optional: Partition, Supernodal
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# MatrixOps requires: Core
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# Modify requires: Core
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# Partition requires: Core, CCOLAMD, METIS. optional: Cholesky
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# Supernodal requires: Core, BLAS, LAPACK
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#
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# CHOLMOD test/demo Modules (all are GNU GPL, do not appear in libcholmod.a):
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# Tcov requires: Core, Check, Cholesky, MatrixOps, Modify, Supernodal
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# optional: Partition
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# Valgrind same as Tcov
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# Demo requires: Core, Check, Cholesky, MatrixOps, Supernodal
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# optional: Partition
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#
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# Configuration flags:
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# -DNCHECK do not include the Check module. License GNU LGPL
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# -DNCHOLESKY do not include the Cholesky module. License GNU LGPL
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# -DNPARTITION do not include the Partition module. License GNU LGPL
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# also do not include METIS.
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# -DNGPL do not include any GNU GPL Modules in the CHOLMOD library:
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# -DNMATRIXOPS do not include the MatrixOps module. License GNU GPL
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# -DNMODIFY do not include the Modify module. License GNU GPL
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# -DNSUPERNODAL do not include the Supernodal module. License GNU GPL
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#
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# -DNPRINT do not print anything.
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# -D'LONGBLAS=long' or -DLONGBLAS='long long' defines the integers used by
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# LAPACK and the BLAS (defaults to 'int')
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# -DNSUNPERF for Solaris only. If defined, do not use the Sun
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# Performance Library
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CHOLMOD_CONFIG =
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#------------------------------------------------------------------------------
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# SuiteSparseQR configuration:
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#------------------------------------------------------------------------------
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# The SuiteSparseQR library can be compiled with the following options:
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#
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# -DNPARTITION do not include the CHOLMOD partition module
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# -DNEXPERT do not include the functions in SuiteSparseQR_expert.cpp
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# -DTIMING enable timing and flop counts
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# -DHAVE_TBB enable the use of Intel's Threading Building Blocks (TBB)
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# default, without timing, without TBB:
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SPQR_CONFIG =
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# with timing and TBB:
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# SPQR_CONFIG = -DTIMING -DHAVE_TBB
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# with timing
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# SPQR_CONFIG = -DTIMING
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# This is needed for IBM AIX: (but not for and C codes, just C++)
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# SPQR_CONFIG = -DBLAS_NO_UNDERSCORE
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# with TBB, you must select this:
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# TBB = -ltbb
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# without TBB:
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TBB =
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# with timing, you must include the timing library:
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# RTLIB = -lrt
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# without timing
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RTLIB =
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#------------------------------------------------------------------------------
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# Linux
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#------------------------------------------------------------------------------
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# Using default compilers:
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# CC = gcc
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# CFLAGS = -O3 -fexceptions
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# alternatives:
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# CFLAGS = -g -fexceptions \
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-Wall -W -Wshadow -Wmissing-prototypes -Wstrict-prototypes \
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-Wredundant-decls -Wnested-externs -Wdisabled-optimization -ansi \
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-funit-at-a-time
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# CFLAGS = -O3 -fexceptions \
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-Wall -W -Werror -Wshadow -Wmissing-prototypes -Wstrict-prototypes \
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-Wredundant-decls -Wnested-externs -Wdisabled-optimization -ansi
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# CFLAGS = -O3 -fexceptions -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE
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# CFLAGS = -O3
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# CFLAGS = -O3 -g -fexceptions
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# CFLAGS = -g -fexceptions \
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-Wall -W -Wshadow \
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-Wredundant-decls -Wdisabled-optimization -ansi
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# consider:
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# -fforce-addr -fmove-all-movables -freduce-all-givs -ftsp-ordering
|
||||
# -frename-registers -ffast-math -funroll-loops
|
||||
|
||||
# Using the Goto BLAS:
|
||||
# BLAS = -lgoto -lfrtbegin -lg2c $(XERBLA) -lpthread
|
||||
|
||||
# Using Intel's icc and ifort compilers:
|
||||
# (does not work for mexFunctions unless you add a mexopts.sh file)
|
||||
# F77 = ifort
|
||||
# CC = icc
|
||||
# CFLAGS = -O3 -xN -vec_report=0
|
||||
# CFLAGS = -g
|
||||
# old (broken): CFLAGS = -ansi -O3 -ip -tpp7 -xW -vec_report0
|
||||
|
||||
# 64bit:
|
||||
# F77FLAGS = -O -m64
|
||||
# CFLAGS = -O3 -fexceptions -m64
|
||||
# BLAS = -lgoto64 -lfrtbegin -lg2c -lpthread $(XERBLA)
|
||||
# LAPACK = -llapack64
|
||||
|
||||
|
||||
# SUSE Linux 10.1, AMD Opteron, with GOTO Blas
|
||||
# F77 = gfortran
|
||||
# BLAS = -lgoto_opteron64 -lgfortran
|
||||
|
||||
# SUSE Linux 10.1, Intel Pentium, with GOTO Blas
|
||||
# F77 = gfortran
|
||||
# BLAS = -lgoto -lgfortran
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# Mac
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# As recommended by macports, http://suitesparse.darwinports.com/
|
||||
# I've tested them myself on Mac OSX 10.6.1 (Snow Leopard), on my MacBook Air.
|
||||
# F77 = gfortran
|
||||
# CFLAGS = -O3 -fno-common -no-cpp-precomp -fexceptions
|
||||
# BLAS = -framework Accelerate
|
||||
# LAPACK = -framework Accelerate
|
||||
|
||||
# Using netlib.org LAPACK and BLAS compiled by gfortran, with and without
|
||||
# optimzation:
|
||||
# BLAS = -lblas_plain -lgfortran
|
||||
# LAPACK = -llapack_plain
|
||||
# BLAS = -lblas_optimized -lgfortran
|
||||
# LAPACK = -llapack_optimized
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# Solaris
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# 32-bit
|
||||
# CFLAGS = -KPIC -dalign -xc99=%none -Xc -xlibmieee -xO5 -xlibmil -m32
|
||||
|
||||
# 64-bit
|
||||
# CFLAGS = -fast -KPIC -xc99=%none -xlibmieee -xlibmil -m64 -Xc
|
||||
|
||||
# FFLAGS = -fast -KPIC -dalign -xlibmil -m64
|
||||
|
||||
# The Sun Performance Library includes both LAPACK and the BLAS:
|
||||
# BLAS = -xlic_lib=sunperf
|
||||
# LAPACK =
|
||||
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# Compaq Alpha
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# 64-bit mode only
|
||||
# CFLAGS = -O2 -std1
|
||||
# BLAS = -ldxml
|
||||
# LAPACK =
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# Macintosh
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# CC = gcc
|
||||
# CFLAGS = -O3 -fno-common -no-cpp-precomp -fexceptions
|
||||
# LIB = -lstdc++
|
||||
# BLAS = -framework Accelerate
|
||||
# LAPACK = -framework Accelerate
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# IBM RS 6000
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# BLAS = -lessl
|
||||
# LAPACK =
|
||||
|
||||
# 32-bit mode:
|
||||
# CFLAGS = -O4 -qipa -qmaxmem=16384 -qproto
|
||||
# F77FLAGS = -O4 -qipa -qmaxmem=16384
|
||||
|
||||
# 64-bit mode:
|
||||
# CFLAGS = -O4 -qipa -qmaxmem=16384 -q64 -qproto
|
||||
# F77FLAGS = -O4 -qipa -qmaxmem=16384 -q64
|
||||
# AR = ar -X64
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# SGI IRIX
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# BLAS = -lscsl
|
||||
# LAPACK =
|
||||
|
||||
# 32-bit mode
|
||||
# CFLAGS = -O
|
||||
|
||||
# 64-bit mode (32 bit int's and 64-bit long's):
|
||||
# CFLAGS = -64
|
||||
# F77FLAGS = -64
|
||||
|
||||
# SGI doesn't have ranlib
|
||||
# RANLIB = echo
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# AMD Opteron (64 bit)
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
# BLAS = -lgoto_opteron64 -lg2c
|
||||
# LAPACK = -llapack_opteron64
|
||||
|
||||
# SUSE Linux 10.1, AMD Opteron
|
||||
# F77 = gfortran
|
||||
# BLAS = -lgoto_opteron64 -lgfortran
|
||||
# LAPACK = -llapack_opteron64
|
||||
|
||||
#------------------------------------------------------------------------------
|
||||
# remove object files and profile output
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
CLEAN = *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno
|
||||
|
|
@ -1,63 +0,0 @@
|
|||
#------------------------------------------------------------------------------
|
||||
# CCOLAMD Makefile
|
||||
#------------------------------------------------------------------------------
|
||||
|
||||
VERSION = 2.7.3
|
||||
|
||||
default: demos
|
||||
|
||||
include ../UFconfig/UFconfig.mk
|
||||
|
||||
# Compile all C code, including the C-callable routine and the mexFunctions.
|
||||
# Do not the MATLAB interface.
|
||||
demos:
|
||||
( cd Lib ; $(MAKE) )
|
||||
( cd Demo ; $(MAKE) )
|
||||
|
||||
# Compile all C code, including the C-callable routine and the mexFunctions.
|
||||
all:
|
||||
( cd Lib ; $(MAKE) )
|
||||
( cd Demo ; $(MAKE) )
|
||||
( cd MATLAB ; $(MAKE) )
|
||||
|
||||
# compile just the C-callable libraries (not mexFunctions or Demos)
|
||||
library:
|
||||
( cd Lib ; $(MAKE) )
|
||||
|
||||
# remove object files, but keep the compiled programs and library archives
|
||||
clean:
|
||||
( cd Lib ; $(MAKE) clean )
|
||||
( cd Demo ; $(MAKE) clean )
|
||||
( cd MATLAB ; $(MAKE) clean )
|
||||
|
||||
# clean, and then remove compiled programs and library archives
|
||||
purge:
|
||||
( cd Lib ; $(MAKE) purge )
|
||||
( cd Demo ; $(MAKE) purge )
|
||||
( cd MATLAB ; $(MAKE) purge )
|
||||
|
||||
distclean: purge
|
||||
|
||||
# get ready for distribution
|
||||
dist: purge
|
||||
( cd Demo ; $(MAKE) dist )
|
||||
|
||||
ccode: library
|
||||
|
||||
lib: library
|
||||
|
||||
# compile the MATLAB mexFunction
|
||||
mex:
|
||||
( cd MATLAB ; $(MAKE) )
|
||||
|
||||
# install CCOLAMD
|
||||
install:
|
||||
$(CP) Lib/libccolamd.a $(INSTALL_LIB)/libccolamd.$(VERSION).a
|
||||
( cd $(INSTALL_LIB) ; ln -sf libccolamd.$(VERSION).a libccolamd.a )
|
||||
$(CP) Include/ccolamd.h $(INSTALL_INCLUDE)
|
||||
|
||||
# uninstall CCOLAMD
|
||||
uninstall:
|
||||
$(RM) $(INSTALL_LIB)/libccolamd*.a
|
||||
$(RM) $(INSTALL_INCLUDE)/ccolamd.h
|
||||
|
||||
|
|
@ -1,36 +0,0 @@
|
|||
# Makefile for UFconfig.c
|
||||
|
||||
VERSION = 3.6.0
|
||||
|
||||
default: ccode
|
||||
|
||||
include UFconfig.mk
|
||||
|
||||
ccode: libufconfig.a
|
||||
|
||||
all: libufconfig.a
|
||||
|
||||
libufconfig.a: UFconfig.c UFconfig.h
|
||||
$(CC) $(CFLAGS) -c UFconfig.c
|
||||
$(AR) libufconfig.a UFconfig.o
|
||||
- $(RM) UFconfig.o
|
||||
|
||||
distclean: purge
|
||||
|
||||
purge: clean
|
||||
- $(RM) *.o *.a
|
||||
|
||||
clean:
|
||||
- $(RM) -r $(CLEAN)
|
||||
|
||||
# install UFconfig
|
||||
install:
|
||||
$(CP) libufconfig.a $(INSTALL_LIB)/libufconfig.$(VERSION).a
|
||||
( cd $(INSTALL_LIB) ; ln -sf libufconfig.$(VERSION).a libufconfig.a )
|
||||
$(CP) UFconfig.h $(INSTALL_INCLUDE)
|
||||
|
||||
# uninstall UFconfig
|
||||
uninstall:
|
||||
$(RM) $(INSTALL_LIB)/libufconfig*.a
|
||||
$(RM) $(INSTALL_INCLUDE)/UFconfig.h
|
||||
|
||||
|
|
@ -1,14 +1,15 @@
|
|||
|
||||
# All the sub-directories that need to be built
|
||||
SUBDIRS = base geometry inference linear nonlinear slam 3rdparty
|
||||
SUBDIRS = 3rdparty base geometry inference linear nonlinear slam
|
||||
|
||||
# And the corresponding libraries produced
|
||||
SUBLIBS = base/libbase.la geometry/libgeometry.la inference/libinference.la \
|
||||
linear/liblinear.la nonlinear/libnonlinear.la slam/libslam.la
|
||||
SUBLIBS = 3rdparty/ccolamd/libccolamd.la base/libbase.la geometry/libgeometry.la \
|
||||
inference/libinference.la linear/liblinear.la nonlinear/libnonlinear.la \
|
||||
slam/libslam.la
|
||||
|
||||
# The following lines specify the actual shared library to be built with libtool
|
||||
lib_LTLIBRARIES = libgtsam.la
|
||||
libgtsam_la_SOURCES =
|
||||
nodist_EXTRA_libgtsam_la_SOURCES = dummy.cxx
|
||||
libgtsam_la_LIBADD = $(SUBLIBS) -L$(CCOLAMDLib) $(BOOST_LDFLAGS) -lccolamd
|
||||
libgtsam_la_LIBADD = $(SUBLIBS) $(BOOST_LDFLAGS)
|
||||
libgtsam_la_LDFLAGS = -no-undefined -version-info 0:0:0
|
||||
|
|
|
|||
|
|
@ -55,7 +55,7 @@ libbase_la_SOURCES = $(sources)
|
|||
|
||||
AM_CPPFLAGS =
|
||||
|
||||
AM_CPPFLAGS += $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
|
||||
AM_CPPFLAGS += $(BOOST_CPPFLAGS) -I$(top_srcdir)
|
||||
AM_LDFLAGS = $(BOOST_LDFLAGS)
|
||||
|
||||
#----------------------------------------------------------------------------------------------------
|
||||
|
|
@ -63,8 +63,8 @@ AM_LDFLAGS = $(BOOST_LDFLAGS)
|
|||
#----------------------------------------------------------------------------------------------------
|
||||
TESTS = $(check_PROGRAMS)
|
||||
AM_DEFAULT_SOURCE_EXT = .cpp
|
||||
AM_LDFLAGS += $(boost_serialization) -L$(CCOLAMDLib) -lccolamd
|
||||
LDADD = libbase.la ../../CppUnitLite/libCppUnitLite.a
|
||||
AM_LDFLAGS += $(boost_serialization)
|
||||
LDADD = libbase.la ../../CppUnitLite/libCppUnitLite.a ../3rdparty/ccolamd/libccolamd.la
|
||||
|
||||
# rule to run an executable
|
||||
%.run: % $(LDADD)
|
||||
|
|
|
|||
|
|
@ -43,17 +43,6 @@ check_PROGRAMS += tests/testEliminationTree
|
|||
check_PROGRAMS += tests/testClusterTree
|
||||
check_PROGRAMS += tests/testJunctionTree
|
||||
|
||||
#----------------------------------------------------------------------------------------------------
|
||||
# discrete
|
||||
#----------------------------------------------------------------------------------------------------
|
||||
|
||||
# Binary Inference
|
||||
#headers += BinaryConditional.h
|
||||
#check_PROGRAMS += tests/testBinaryBayesNet
|
||||
|
||||
# Timing tests
|
||||
#noinst_PROGRAMS = tests/timeSymbolMaps
|
||||
|
||||
#----------------------------------------------------------------------------------------------------
|
||||
# Create a libtool library that is not installed
|
||||
# It will be packaged in the toplevel libgtsam.la as specfied in ../Makefile.am
|
||||
|
|
@ -64,7 +53,7 @@ inferencedir = $(pkgincludedir)/inference
|
|||
inference_HEADERS = $(headers)
|
||||
noinst_LTLIBRARIES = libinference.la
|
||||
libinference_la_SOURCES = $(sources)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
|
||||
AM_LDFLAGS = $(BOOST_LDFLAGS)
|
||||
AM_CXXFLAGS =
|
||||
|
||||
|
|
@ -73,8 +62,8 @@ AM_CXXFLAGS =
|
|||
#----------------------------------------------------------------------------------------------------
|
||||
TESTS = $(check_PROGRAMS)
|
||||
AM_LDFLAGS += $(boost_serialization)
|
||||
LDADD = libinference.la ../base/libbase.la
|
||||
LDADD += ../../CppUnitLite/libCppUnitLite.a
|
||||
LDADD = libinference.la ../base/libbase.la ../3rdparty/ccolamd/libccolamd.la
|
||||
LDADD += ../../CppUnitLite/libCppUnitLite.a
|
||||
AM_DEFAULT_SOURCE_EXT = .cpp
|
||||
|
||||
# rule to run an executable
|
||||
|
|
|
|||
|
|
@ -23,7 +23,7 @@
|
|||
#include <iostream>
|
||||
#include <vector>
|
||||
|
||||
#include <ccolamd.h>
|
||||
#include <gtsam/3rdparty/ccolamd/ccolamd.h>
|
||||
|
||||
using namespace std;
|
||||
|
||||
|
|
|
|||
|
|
@ -55,7 +55,7 @@ lineardir = $(pkgincludedir)/linear
|
|||
linear_HEADERS = $(headers)
|
||||
noinst_LTLIBRARIES = liblinear.la
|
||||
liblinear_la_SOURCES = $(sources)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
|
||||
AM_LDFLAGS = $(BOOST_LDFLAGS)
|
||||
AM_CXXFLAGS =
|
||||
|
||||
|
|
@ -64,7 +64,7 @@ AM_CXXFLAGS =
|
|||
#----------------------------------------------------------------------------------------------------
|
||||
TESTS = $(check_PROGRAMS)
|
||||
AM_LDFLAGS += $(boost_serialization)
|
||||
LDADD = liblinear.la ../inference/libinference.la ../base/libbase.la
|
||||
LDADD = liblinear.la ../inference/libinference.la ../base/libbase.la ../3rdparty/ccolamd/libccolamd.la
|
||||
LDADD += ../../CppUnitLite/libCppUnitLite.a
|
||||
AM_DEFAULT_SOURCE_EXT = .cpp
|
||||
|
||||
|
|
|
|||
|
|
@ -43,7 +43,7 @@ nonlineardir = $(pkgincludedir)/nonlinear
|
|||
nonlinear_HEADERS = $(headers)
|
||||
noinst_LTLIBRARIES = libnonlinear.la
|
||||
libnonlinear_la_SOURCES = $(sources)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
|
||||
AM_LDFLAGS = $(BOOST_LDFLAGS)
|
||||
AM_CXXFLAGS =
|
||||
|
||||
|
|
@ -52,7 +52,7 @@ AM_CXXFLAGS =
|
|||
#----------------------------------------------------------------------------------------------------
|
||||
TESTS = $(check_PROGRAMS)
|
||||
AM_LDFLAGS += $(boost_serialization)
|
||||
LDADD = libnonlinear.la ../linear/liblinear.la ../inference/libinference.la ../base/libbase.la
|
||||
LDADD = libnonlinear.la ../linear/liblinear.la ../inference/libinference.la ../base/libbase.la ../3rdparty/ccolamd/libccolamd.la
|
||||
LDADD += ../../CppUnitLite/libCppUnitLite.a
|
||||
AM_DEFAULT_SOURCE_EXT = .cpp
|
||||
|
||||
|
|
|
|||
|
|
@ -64,7 +64,7 @@ slamdir = $(pkgincludedir)/slam
|
|||
slam_HEADERS = $(headers)
|
||||
noinst_LTLIBRARIES = libslam.la
|
||||
libslam_la_SOURCES = $(sources)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
|
||||
AM_LDFLAGS = $(BOOST_LDFLAGS)
|
||||
|
||||
#----------------------------------------------------------------------------------------------------
|
||||
|
|
@ -72,8 +72,8 @@ AM_LDFLAGS = $(BOOST_LDFLAGS)
|
|||
#----------------------------------------------------------------------------------------------------
|
||||
TESTS = $(check_PROGRAMS)
|
||||
AM_DEFAULT_SOURCE_EXT = .cpp
|
||||
AM_LDFLAGS += $(boost_serialization) -L$(CCOLAMDLib) -lccolamd
|
||||
LDADD = libslam.la ../geometry/libgeometry.la ../nonlinear/libnonlinear.la ../linear/liblinear.la ../inference/libinference.la ../base/libbase.la
|
||||
AM_LDFLAGS += $(boost_serialization)
|
||||
LDADD = libslam.la ../geometry/libgeometry.la ../nonlinear/libnonlinear.la ../linear/liblinear.la ../inference/libinference.la ../base/libbase.la ../3rdparty/ccolamd/libccolamd.la
|
||||
LDADD += ../../CppUnitLite/libCppUnitLite.a
|
||||
|
||||
# rule to run an executable
|
||||
|
|
|
|||
|
|
@ -34,7 +34,7 @@ noinst_PROGRAMS = timeGaussianFactorGraph timeSequentialOnDataset timeMultifront
|
|||
#----------------------------------------------------------------------------------------------------
|
||||
TESTS = $(check_PROGRAMS)
|
||||
AM_LDFLAGS = $(BOOST_LDFLAGS)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(CCOLAMDInc) -I$(top_srcdir)
|
||||
AM_CPPFLAGS = $(BOOST_CPPFLAGS) -I$(top_srcdir)
|
||||
|
||||
# link to serialization library for test
|
||||
if ENABLE_SERIALIZATION
|
||||
|
|
|
|||
Loading…
Reference in New Issue