docstrings and formatting
parent
b99bf4e929
commit
2f6b8d6314
|
|
@ -16,23 +16,41 @@ import gtsam
|
||||||
from gtsam.utils.test_case import GtsamTestCase
|
from gtsam.utils.test_case import GtsamTestCase
|
||||||
from gtsam.symbol_shorthand import B
|
from gtsam.symbol_shorthand import B
|
||||||
|
|
||||||
|
|
||||||
class TestBasis(GtsamTestCase):
|
class TestBasis(GtsamTestCase):
|
||||||
|
"""Tests Basis module python bindings
|
||||||
|
"""
|
||||||
def test_fit_basis(self):
|
def test_fit_basis(self):
|
||||||
|
"""Tests FitBasis python binding for FourierBasis, Chebyshev1Basis, Chebyshev2Basis, and
|
||||||
|
Chebyshev2.
|
||||||
|
It tests FitBasis by fitting to a ground-truth function that can be represented exactly in
|
||||||
|
the basis, then checking that the regression (fit result) matches the function. For the
|
||||||
|
Chebyshev bases, the line y=x is used to generate the data while for Fourier, 0.7*cos(x) is
|
||||||
|
used.
|
||||||
|
"""
|
||||||
f = lambda x: x # line y = x
|
f = lambda x: x # line y = x
|
||||||
N = 2
|
N = 2
|
||||||
datax = [0., 0.5, 0.75]
|
datax = [0., 0.5, 0.75]
|
||||||
interpx = np.linspace(0., 1., 10)
|
interpx = np.linspace(0., 1., 10)
|
||||||
noise = gtsam.noiseModel.Unit.Create(1)
|
noise = gtsam.noiseModel.Unit.Create(1)
|
||||||
|
|
||||||
|
def evaluate(basis, fitparams, x):
|
||||||
|
# until wrapper for Basis functors are ready, this is how to evaluate a basis function.
|
||||||
|
return basis.WeightMatrix(N, x) @ fitparams
|
||||||
|
|
||||||
def testBasis(fitter, basis, f=f):
|
def testBasis(fitter, basis, f=f):
|
||||||
|
# test a basis by checking that the fit result matches the function at x-values interpx.
|
||||||
data = {x: f(x) for x in datax}
|
data = {x: f(x) for x in datax}
|
||||||
fit = fitter(data, noise, N)
|
fit = fitter(data, noise, N)
|
||||||
coeff = fit.parameters()
|
coeff = fit.parameters()
|
||||||
interpy = basis.WeightMatrix(N, interpx) @ coeff
|
interpy = evaluate(basis, coeff, interpx)
|
||||||
np.testing.assert_almost_equal(interpy, np.array([f(x) for x in interpx]), decimal=7)
|
np.testing.assert_almost_equal(interpy, np.array([f(x) for x in interpx]), decimal=7)
|
||||||
|
|
||||||
testBasis(gtsam.FitBasisFourierBasis, gtsam.FourierBasis, f=lambda x: 0.7 * np.cos(x))
|
testBasis(gtsam.FitBasisFourierBasis, gtsam.FourierBasis, f=lambda x: 0.7 * np.cos(x))
|
||||||
testBasis(gtsam.FitBasisChebyshev1Basis, gtsam.Chebyshev1Basis)
|
testBasis(gtsam.FitBasisChebyshev1Basis, gtsam.Chebyshev1Basis)
|
||||||
testBasis(gtsam.FitBasisChebyshev2Basis, gtsam.Chebyshev2Basis)
|
testBasis(gtsam.FitBasisChebyshev2Basis, gtsam.Chebyshev2Basis)
|
||||||
testBasis(gtsam.FitBasisChebyshev2, gtsam.Chebyshev2)
|
testBasis(gtsam.FitBasisChebyshev2, gtsam.Chebyshev2)
|
||||||
|
|
||||||
|
|
||||||
if __name__ == "__main__":
|
if __name__ == "__main__":
|
||||||
unittest.main()
|
unittest.main()
|
||||||
|
|
|
||||||
Loading…
Reference in New Issue