break down tests to make reporting clearer

release/4.3a0
Varun Agrawal 2021-08-29 04:36:57 -04:00
parent 65837c1030
commit 289cb8f35b
1 changed files with 65 additions and 27 deletions

View File

@ -19,39 +19,77 @@ from gtsam.symbol_shorthand import B
class TestBasis(GtsamTestCase):
"""
Tests Basis module python bindings.
"""
def test_fit_basis(self):
"""
Tests FitBasis python binding for FourierBasis, Chebyshev1Basis, Chebyshev2Basis, and
Chebyshev2.
Tests FitBasis python binding for FourierBasis, Chebyshev1Basis, Chebyshev2Basis, and Chebyshev2.
It tests FitBasis by fitting to a ground-truth function that can be represented exactly in
the basis, then checking that the regression (fit result) matches the function. For the
Chebyshev bases, the line y=x is used to generate the data while for Fourier, 0.7*cos(x) is
used.
"""
f = lambda x: x # line y = x
N = 2
datax = [0., 0.5, 0.75]
interpx = np.linspace(0., 1., 10)
noise = gtsam.noiseModel.Unit.Create(1)
def setUp(self):
self.N = 2
self.x = [0., 0.5, 0.75]
self.interpx = np.linspace(0., 1., 10)
self.noise = gtsam.noiseModel.Unit.Create(1)
def evaluate(basis, fitparams, x):
# until wrapper for Basis functors are ready, this is how to evaluate a basis function.
return basis.WeightMatrix(N, x) @ fitparams
def evaluate(self, basis, fitparams, x):
"""
Until wrapper for Basis functors are ready,
this is how to evaluate a basis function.
"""
return basis.WeightMatrix(self.N, x) @ fitparams
def testBasis(fitter, basis, f=f):
# test a basis by checking that the fit result matches the function at x-values interpx.
data = {x: f(x) for x in datax}
fit = fitter(data, noise, N)
def fit_basis_helper(self, fitter, basis, f=lambda x: x):
"""Helper method to fit data to a specified fitter using a specified basis."""
data = {x: f(x) for x in self.x}
fit = fitter(data, self.noise, self.N)
coeff = fit.parameters()
interpy = evaluate(basis, coeff, interpx)
np.testing.assert_almost_equal(interpy, np.array([f(x) for x in interpx]), decimal=7)
interpy = self.evaluate(basis, coeff, self.interpx)
return interpy
testBasis(gtsam.FitBasisFourierBasis, gtsam.FourierBasis, f=lambda x: 0.7 * np.cos(x))
testBasis(gtsam.FitBasisChebyshev1Basis, gtsam.Chebyshev1Basis)
testBasis(gtsam.FitBasisChebyshev2Basis, gtsam.Chebyshev2Basis)
testBasis(gtsam.FitBasisChebyshev2, gtsam.Chebyshev2)
def test_fit_basis_fourier(self):
"""Fit a Fourier basis."""
f = lambda x: 0.7 * np.cos(x)
interpy = self.fit_basis_helper(gtsam.FitBasisFourierBasis,
gtsam.FourierBasis, f)
# test a basis by checking that the fit result matches the function at x-values interpx.
np.testing.assert_almost_equal(interpy,
np.array([f(x) for x in self.interpx]),
decimal=7)
def test_fit_basis_chebyshev1basis(self):
"""Fit a Chebyshev1 basis."""
f = lambda x: x
interpy = self.fit_basis_helper(gtsam.FitBasisChebyshev1Basis,
gtsam.Chebyshev1Basis, f)
# test a basis by checking that the fit result matches the function at x-values interpx.
np.testing.assert_almost_equal(interpy,
np.array([f(x) for x in self.interpx]),
decimal=7)
def test_fit_basis_chebyshev2basis(self):
"""Fit a Chebyshev2 basis."""
f = lambda x: x
interpy = self.fit_basis_helper(gtsam.FitBasisChebyshev2Basis,
gtsam.Chebyshev2Basis)
# test a basis by checking that the fit result matches the function at x-values interpx.
np.testing.assert_almost_equal(interpy,
np.array([f(x) for x in self.interpx]),
decimal=7)
def test_fit_basis_chebyshev2(self):
"""Fit a Chebyshev2 pseudospectral basis."""
f = lambda x: x
interpy = self.fit_basis_helper(gtsam.FitBasisChebyshev2,
gtsam.Chebyshev2)
# test a basis by checking that the fit result matches the function at x-values interpx.
np.testing.assert_almost_equal(interpy,
np.array([f(x) for x in self.interpx]),
decimal=7)
if __name__ == "__main__":