wrap sparseBA namespace for matlab and add an example
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1abf81052f
commit
18fe7b17d8
81
gtsam.h
81
gtsam.h
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@ -458,7 +458,6 @@ class CalibratedCamera {
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double range(const gtsam::Point3& p) const; // TODO: Other overloaded range methods
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};
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class SimpleCamera {
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// Standard Constructors and Named Constructors
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SimpleCamera();
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@ -1358,3 +1357,83 @@ class LevenbergMarquardtOptimizer {
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};
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}///\namespace visualSLAM
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//************************************************************************
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// sparse BA
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//************************************************************************
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#include <gtsam/slam/sparseBA.h>
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namespace sparseBA {
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class Values {
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Values();
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Values(const sparseBA::Values& values);
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size_t size() const;
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void print(string s) const;
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bool exists(size_t key);
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gtsam::KeyVector keys() const;
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// Access to cameras
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sparseBA::Values allSimpleCameras() const ;
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size_t nrSimpleCameras() const ;
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gtsam::KeyVector simpleCameraKeys() const ;
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void insertSimpleCamera(size_t j, const gtsam::SimpleCamera& camera);
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void updateSimpleCamera(size_t j, const gtsam::SimpleCamera& camera);
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gtsam::SimpleCamera simpleCamera(size_t j) const;
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// Access to points, inherited from visualSLAM
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sparseBA::Values allPoints() const;
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size_t nrPoints() const;
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gtsam::KeyVector pointKeys() const; // Note the switch to KeyVector, rather than KeyList
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void insertPoint(size_t key, const gtsam::Point3& pose);
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void updatePoint(size_t key, const gtsam::Point3& pose);
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gtsam::Point3 point(size_t j);
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Matrix points() const;
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};
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class Graph {
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Graph();
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Graph(const gtsam::NonlinearFactorGraph& graph);
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Graph(const sparseBA::Graph& graph);
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// Information
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Matrix reprojectionErrors(const sparseBA::Values& values) const;
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// inherited from FactorGraph
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void print(string s) const;
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bool equals(const sparseBA::Graph& fg, double tol) const;
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size_t size() const;
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bool empty() const;
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void remove(size_t i);
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size_t nrFactors() const;
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gtsam::NonlinearFactor* at(size_t i) const;
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double error(const sparseBA::Values& values) const;
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gtsam::Ordering* orderingCOLAMD(const sparseBA::Values& values) const;
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gtsam::GaussianFactorGraph* linearize(const sparseBA::Values& values, const gtsam::Ordering& ordering) const;
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sparseBA::Values optimize(const sparseBA::Values& initialEstimate, size_t verbosity) const;
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sparseBA::LevenbergMarquardtOptimizer optimizer(const sparseBA::Values& initialEstimate, const gtsam::LevenbergMarquardtParams& parameters) const;
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gtsam::Marginals marginals(const sparseBA::Values& solution) const;
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// inherited from visualSLAM
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void addPointConstraint(size_t pointKey, const gtsam::Point3& p);
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void addPointPrior(size_t pointKey, const gtsam::Point3& p, const gtsam::noiseModel::Base* model);
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// add factors
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void addSimpleCameraPrior(size_t cameraKey, const gtsam::SimpleCamera &camera, gtsam::noiseModel::Base* model);
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void addSimpleCameraConstraint(size_t cameraKey, const gtsam::SimpleCamera &camera);
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void addSimpleCameraMeasurement(const gtsam::Point2 &z, gtsam::noiseModel::Base* model, size_t cameraKey, size_t pointKey);
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};
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class LevenbergMarquardtOptimizer {
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double lambda() const;
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void iterate();
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double error() const;
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size_t iterations() const;
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sparseBA::Values optimize();
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sparseBA::Values optimizeSafely();
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sparseBA::Values values() const;
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};
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}///\namespace sparseBA
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@ -0,0 +1,60 @@
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/**
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* @file sparseBA.cpp
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* @brief
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* @date Jul 6, 2012
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* @author Yong-Dian Jian
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*/
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#include <gtsam/slam/sparseBA.h>
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namespace sparseBA {
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/* ************************************************************************* */
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void Graph::addSimpleCameraConstraint(Key cameraKey, const SimpleCamera &camera) {
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addCameraConstraint<SimpleCamera>(cameraKey, camera);
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}
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/* ************************************************************************* */
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void Graph::addSimpleCameraPrior(Key cameraKey, const SimpleCamera &camera, SharedNoiseModel &model) {
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addCameraPrior<SimpleCamera>(cameraKey, camera, model);
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}
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/* ************************************************************************* */
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void Graph::addSimpleCameraMeasurement(const Point2 &z, SharedNoiseModel& model, Index cameraKey, Index pointKey) {
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addMeasurement<SimpleCamera>(z, model, cameraKey, pointKey);
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}
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/* ************************************************************************* */
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Matrix Graph::reprojectionErrors(const Values& values) const {
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// TODO: support the other calibration objects. Now it only works for Cal3_S2.
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typedef GeneralSFMFactor<SimpleCamera, Point3> SFMFactor;
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typedef GeneralSFMFactor2<Cal3_S2> SFMFactor2;
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// first count
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size_t K = 0, k=0;
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BOOST_FOREACH(const sharedFactor& f, *this)
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if (boost::dynamic_pointer_cast<const SFMFactor>(f)) ++K;
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else if (boost::dynamic_pointer_cast<const SFMFactor2>(f)) ++K;
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// now fill
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Matrix errors(2,K);
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BOOST_FOREACH(const sharedFactor& f, *this) {
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boost::shared_ptr<const SFMFactor> p = boost::dynamic_pointer_cast<const SFMFactor>(f);
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if (p) {
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errors.col(k++) = p->unwhitenedError(values);
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continue;
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}
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boost::shared_ptr<const SFMFactor2> p2 = boost::dynamic_pointer_cast<const SFMFactor2>(f);
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if (p2) {
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errors.col(k++) = p2->unwhitenedError(values);
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}
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}
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return errors;
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}
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/* ************************************************************************* */
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}
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@ -20,11 +20,45 @@
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#include <gtsam/slam/visualSLAM.h>
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#include <gtsam/slam/GeneralSFMFactor.h>
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#include <gtsam/geometry/SimpleCamera.h>
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namespace sparseBA {
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using namespace gtsam;
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/// Values class, inherited from Values, mainly used as a convenience for MATLAB wrapper
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struct Values: public visualSLAM::Values {
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typedef boost::shared_ptr<Values> shared_ptr;
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typedef gtsam::Values::ConstFiltered<SimpleCamera> SimpleCameraFiltered;
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typedef gtsam::Values::ConstFiltered<Cal3_S2> Cal3_S2Filtered;
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/// Default constructor
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Values() {}
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/// Copy constructor
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Values(const gtsam::Values& values) : visualSLAM::Values(values) {}
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/// Constructor from filtered values view of poses
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Values(const SimpleCameraFiltered& view) : visualSLAM::Values(view) {}
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/// Constructor from filtered values view of points
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Values(const PointFiltered& view) : visualSLAM::Values(view) {}
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SimpleCameraFiltered allSimpleCameras() const { return this->filter<SimpleCamera>(); } ///< camera view
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size_t nrSimpleCameras() const { return allSimpleCameras().size(); } ///< get number of poses
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KeyList simpleCameraKeys() const { return allSimpleCameras().keys(); } ///< get keys to poses only
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/// insert a camera
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void insertSimpleCamera(Key j, const SimpleCamera& camera) { insert(j, camera); }
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/// update a camera
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void updateSimpleCamera(Key j, const SimpleCamera& camera) { update(j, camera); }
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/// get a camera
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SimpleCamera simpleCamera(Key j) const { return at<SimpleCamera>(j); }
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};
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/**
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* Graph class, inherited from NonlinearFactorGraph, used as a convenience for MATLAB wrapper
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* @addtogroup SLAM
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@ -37,6 +71,34 @@ namespace sparseBA {
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/// Copy constructor given any other NonlinearFactorGraph
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Graph(const NonlinearFactorGraph& graph): visualSLAM::Graph(graph) {}
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/// check if two graphs are equal
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bool equals(const Graph& p, double tol = 1e-9) const {
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return NonlinearFactorGraph::equals(p, tol);
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}
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/**
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* Add a prior on a pose
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* @param key variable key of the camera
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* @param p around which soft prior is defined
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* @param model uncertainty model of this prior
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*/
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template <typename Camera>
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void addCameraPrior(Key cameraKey, const Camera &camera, SharedNoiseModel &model = noiseModel::Unit::Create(Camera::Dim())) {
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sharedFactor factor(new PriorFactor<Camera>(cameraKey, camera, model));
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push_back(factor);
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}
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/**
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* Add a constraint on a camera
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* @param key variable key of the camera
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* @param p to which camera to constrain it to
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*/
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template <typename Camera>
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void addCameraConstraint(Key cameraKey, const Camera &camera) {
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sharedFactor factor(new NonlinearEquality<Camera>(cameraKey, camera));
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push_back(factor);
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}
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/**
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* Add a 2d projection measurement
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* @param z the measurement
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@ -52,7 +114,7 @@ namespace sparseBA {
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}
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/**
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* Add a 2d projection measurement
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* Add a 2d projection measurement, but supports separated (or shared) pose and calibration object
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* @param z the measurement
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* @param model the noise model for the measurement
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* @param poseKey variable key for the pose
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@ -65,6 +127,17 @@ namespace sparseBA {
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boost::shared_ptr<SFMFactor> factor(new SFMFactor(z, model, posekey, pointkey, calibkey));
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push_back(factor);
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}
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/// Return a 2*K Matrix of reprojection errors
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Matrix reprojectionErrors(const Values& values) const;
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/**
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* Matlab-specific wrappers
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*/
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void addSimpleCameraPrior(Key cameraKey, const SimpleCamera &camera, SharedNoiseModel &model);
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void addSimpleCameraConstraint(Key cameraKey, const SimpleCamera &camera) ;
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void addSimpleCameraMeasurement(const Point2 &z, SharedNoiseModel& model, Index cameraKey, Index pointKey);
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};
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}
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@ -0,0 +1,85 @@
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% GTSAM Copyright 2010, Georgia Tech Research Corporation,
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% Atlanta, Georgia 30332-0415
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% All Rights Reserved
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% Authors: Frank Dellaert, et al. (see THANKS for the full author list)
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%
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% See LICENSE for the license information
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%
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% @brief An SFM example (adapted from SFMExample.m) optimizing calibration
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% @author Yong-Dian Jian
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%% Assumptions
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% - Landmarks as 8 vertices of a cube: (10,10,10) (-10,10,10) etc...
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% - Cameras are on a circle around the cube, pointing at the world origin
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% - Each camera sees all landmarks.
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% - Visual measurements as 2D points are given, corrupted by Gaussian noise.
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% Data Options
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options.triangle = false;
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options.nrCameras = 10;
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options.showImages = false;
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%% Generate data
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[data,truth] = VisualISAMGenerateData(options);
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measurementNoiseSigma = 1.0;
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pointNoiseSigma = 0.1;
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cameraNoiseSigmas = [0.001 0.001 0.001 0.1 0.1 0.1 ...
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0.001*ones(1,5)]';
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%% Create the graph (defined in visualSLAM.h, derived from NonlinearFactorGraph)
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graph = sparseBAGraph;
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%% Add factors for all measurements
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measurementNoise = gtsamnoiseModelIsotropic_Sigma(2,measurementNoiseSigma);
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for i=1:length(data.Z)
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for k=1:length(data.Z{i})
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j = data.J{i}{k};
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graph.addSimpleCameraMeasurement(data.Z{i}{k}, measurementNoise, symbol('c',i), symbol('p',j));
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end
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end
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%% Add Gaussian priors for a pose and a landmark to constrain the system
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cameraPriorNoise = gtsamnoiseModelDiagonal_Sigmas(cameraNoiseSigmas);
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firstCamera = gtsamSimpleCamera(truth.cameras{1}.pose, truth.K);
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graph.addSimpleCameraPrior(symbol('c',1), firstCamera, cameraPriorNoise);
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pointPriorNoise = gtsamnoiseModelIsotropic_Sigma(3,pointNoiseSigma);
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graph.addPointPrior(symbol('p',1), truth.points{1}, pointPriorNoise);
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%% Print the graph
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graph.print(sprintf('\nFactor graph:\n'));
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%% Initialize cameras and points close to ground truth in this example
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initialEstimate = sparseBAValues;
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for i=1:size(truth.cameras,2)
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pose_i = truth.cameras{i}.pose.retract(0.1*randn(6,1));
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camera_i = gtsamSimpleCamera(pose_i, truth.K);
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initialEstimate.insertSimpleCamera(symbol('c',i), camera_i);
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end
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for j=1:size(truth.points,2)
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point_j = truth.points{j}.retract(0.1*randn(3,1));
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initialEstimate.insertPoint(symbol('p',j), point_j);
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end
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initialEstimate.print(sprintf('\nInitial estimate:\n '));
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%% Fine grain optimization, allowing user to iterate step by step
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parameters = gtsamLevenbergMarquardtParams;
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parameters.setlambdaInitial(1.0);
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parameters.setVerbosityLM('trylambda');
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optimizer = graph.optimizer(initialEstimate, parameters);
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for i=1:5
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optimizer.iterate();
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end
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result = optimizer.values();
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result.print(sprintf('\nFinal result:\n '));
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