expose GraphvizFormatting and test it in Python

release/4.3a0
senselessDev 2022-01-23 13:39:21 +01:00
parent a2caa0caf7
commit 020071719e
3 changed files with 162 additions and 2 deletions

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@ -222,6 +222,12 @@ class DotWriter {
DotWriter(double figureWidthInches = 5, double figureHeightInches = 5,
bool plotFactorPoints = true, bool connectKeysToFactor = true,
bool binaryEdges = true);
double figureWidthInches;
double figureHeightInches;
bool plotFactorPoints;
bool connectKeysToFactor;
bool binaryEdges;
};
#include <gtsam/discrete/DiscreteFactorGraph.h>

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@ -133,6 +133,18 @@ class Ordering {
void serialize() const;
};
#include <gtsam/nonlinear/GraphvizFormatting.h>
class GraphvizFormatting : gtsam::DotWriter {
GraphvizFormatting();
enum Axis { X, Y, Z, NEGX, NEGY, NEGZ };
Axis paperHorizontalAxis;
Axis paperVerticalAxis;
double scale;
bool mergeSimilarFactors;
};
#include <gtsam/nonlinear/NonlinearFactorGraph.h>
class NonlinearFactorGraph {
NonlinearFactorGraph();
@ -195,10 +207,13 @@ class NonlinearFactorGraph {
string dot(
const gtsam::Values& values,
const gtsam::KeyFormatter& keyFormatter = gtsam::DefaultKeyFormatter);
const gtsam::KeyFormatter& keyFormatter = gtsam::DefaultKeyFormatter,
const GraphvizFormatting& writer = GraphvizFormatting());
void saveGraph(const string& s, const gtsam::Values& values,
const gtsam::KeyFormatter& keyFormatter =
gtsam::DefaultKeyFormatter) const;
gtsam::DefaultKeyFormatter,
const GraphvizFormatting& writer =
GraphvizFormatting()) const;
};
#include <gtsam/nonlinear/NonlinearFactor.h>

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@ -0,0 +1,139 @@
"""
GTSAM Copyright 2010-2021, Georgia Tech Research Corporation,
Atlanta, Georgia 30332-0415
All Rights Reserved
See LICENSE for the license information
Unit tests for Graphviz formatting of NonlinearFactorGraph.
Author: Frank Dellaert & senselessDev
"""
# pylint: disable=no-member, invalid-name
import unittest
import textwrap
import numpy as np
import gtsam
from gtsam.utils.test_case import GtsamTestCase
class TestGraphvizFormatting(GtsamTestCase):
"""Tests for saving NonlinearFactorGraph to GraphViz format."""
def setUp(self):
self.graph = gtsam.NonlinearFactorGraph()
odometry = gtsam.Pose2(2.0, 0.0, 0.0)
odometryNoise = gtsam.noiseModel.Diagonal.Sigmas(
np.array([0.2, 0.2, 0.1]))
self.graph.add(gtsam.BetweenFactorPose2(0, 1, odometry, odometryNoise))
self.graph.add(gtsam.BetweenFactorPose2(1, 2, odometry, odometryNoise))
self.values = gtsam.Values()
self.values.insert_pose2(0, gtsam.Pose2(0., 0., 0.))
self.values.insert_pose2(1, gtsam.Pose2(2., 0., 0.))
self.values.insert_pose2(2, gtsam.Pose2(4., 0., 0.))
def test_default(self):
"""Test with default GraphvizFormatting"""
expected_result = """\
graph {
size="5,5";
var0[label="0", pos="0,0!"];
var1[label="1", pos="0,2!"];
var2[label="2", pos="0,4!"];
factor0[label="", shape=point];
var0--factor0;
var1--factor0;
factor1[label="", shape=point];
var1--factor1;
var2--factor1;
}
"""
self.assertEqual(self.graph.dot(self.values),
textwrap.dedent(expected_result))
def test_swapped_axes(self):
"""Test with user-defined GraphvizFormatting swapping x and y"""
expected_result = """\
graph {
size="5,5";
var0[label="0", pos="0,0!"];
var1[label="1", pos="2,0!"];
var2[label="2", pos="4,0!"];
factor0[label="", shape=point];
var0--factor0;
var1--factor0;
factor1[label="", shape=point];
var1--factor1;
var2--factor1;
}
"""
graphviz_formatting = gtsam.GraphvizFormatting()
graphviz_formatting.paperHorizontalAxis = gtsam.GraphvizFormatting.Axis.X
graphviz_formatting.paperVerticalAxis = gtsam.GraphvizFormatting.Axis.Y
self.assertEqual(self.graph.dot(self.values,
writer=graphviz_formatting),
textwrap.dedent(expected_result))
def test_factor_points(self):
"""Test with user-defined GraphvizFormatting without factor points"""
expected_result = """\
graph {
size="5,5";
var0[label="0", pos="0,0!"];
var1[label="1", pos="0,2!"];
var2[label="2", pos="0,4!"];
var0--var1;
var1--var2;
}
"""
graphviz_formatting = gtsam.GraphvizFormatting()
graphviz_formatting.plotFactorPoints = False
self.assertEqual(self.graph.dot(self.values,
writer=graphviz_formatting),
textwrap.dedent(expected_result))
def test_width_height(self):
"""Test with user-defined GraphvizFormatting for width and height"""
expected_result = """\
graph {
size="20,10";
var0[label="0", pos="0,0!"];
var1[label="1", pos="0,2!"];
var2[label="2", pos="0,4!"];
factor0[label="", shape=point];
var0--factor0;
var1--factor0;
factor1[label="", shape=point];
var1--factor1;
var2--factor1;
}
"""
graphviz_formatting = gtsam.GraphvizFormatting()
graphviz_formatting.figureWidthInches = 20
graphviz_formatting.figureHeightInches = 10
self.assertEqual(self.graph.dot(self.values,
writer=graphviz_formatting),
textwrap.dedent(expected_result))
if __name__ == "__main__":
unittest.main()